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Gene Info

Gene Information For:Hs. SF3B5, Splicing factor 3b, subunit 5, 10kDa
Sequence ID:NM_031287

Database Links

UniGeneEntrez GeneDTPSNPViewerAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 144457710 - 144458403

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3352960Full LengthBC000198splicing factor 3b, subunit 5, 10kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112577  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_031287 NP_112577 Q9BWJ5 SF3b10

Related Sequences

 
mRNAGenPeptSwissProt
BC000198 AAH00198 Q9BWJ5
AK312079 BAG35015 B2R568
AM393071 CAL37949  
BK000562 DAA00073 Q9BWJ5

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SF3B5 NP_112577 M.musculus Sf3b5 66125 Gene Info NP_780311 99
R.norvegicus Sf3b5 680891   XP_001059359 99
D.melanogaster CG11985 50007   NP_652189 84
A.gambiae AgaP_AGAP011907 1280756   XP_320622 80
A.thaliana AT4G14342 827077   NP_849379 63
N.crassa NCU02000.1 2710983   XP_329190 57
M.grisea MGG_03658 2676601   XP_361115 56
S.pombe SPBC211.05 2540636   NP_596615 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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