CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. SURF4, Surfeit 4
Sequence ID:NM_033161

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 135219568 - 135232776

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5014698Full LengthBC018741surfeit 4
5203634Full LengthBC111023surfeit 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149351  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_033161 NP_149351 O15260 SURF4

Related Sequences

 
mRNAGenPeptSwissProt
AF078866 AAD44498 O15260
AF078867 AAD44499 O15260
BC018741 AAH18741 O15260
BC111023 AAI11024 O15260
DQ892024 ABM82950  
DQ895216 ABM86142  
AK315488 BAG37872 O15260
Y14820 CAA75099 O15260
AM392907 CAL37785  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SURF4 NP_149351 M.musculus Surf4 20932 Gene Info NP_035642 99
R.norvegicus Surf4_predicted 619346   NP_001029040 99
C.elegans sft-4 180843   NP_508970 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.