CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. NSUN5B, NOL1/NOP2/Sun domain family, member 5B
Sequence ID:NM_001039575
NM_145645
NM_001039576

Database Links

UniGeneEntrez GeneSNPViewerAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 74877821 - 74884001

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939823Full LengthBC093978NOL1/NOP2/Sun domain family, member 5B
40022630Full LengthBC107112NOL1/NOP2/Sun domain family, member 5B
5741853IncompleteBC065512NOL1/NOP2/Sun domain family, member 5B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam Motifs
NM_001039575 NP_001034664    
NM_001039576 NP_001034665    
NM_145645 NP_663620    

Related Sequences

 
mRNAGenPeptSwissProt
BC093978 AAH93978 Q3KNT7
BC107112 AAI07113 Q3KNT7
AF416610 AAM62318 Q3KNT7
AK094312 BAG52857 B3KSU5
AK126486 BAG54336 B3KX24
AK128374 BAG54668 B3KX24

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.