CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. PTPN7, Protein tyrosine phosphatase, non-receptor type 7
Sequence ID:NM_080588
NM_002832

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 200385601 - 200394200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3543111Full LengthBC001746protein tyrosine phosphatase, non-receptor type 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002823  NP_542155  

Protein Infomation

RefSeq

mRNAProteinSwissProtEnzymePfam Motifs
NM_002832 NP_002823 P35236 EC 3.1.3.48 Y_phosphatase
NM_080588 NP_542155     Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M64322 AAA59531 P35236 EC 3.1.3.48
BC001746 AAH01746 P35236 EC 3.1.3.48
AF394064 AAM69538 Q8NFX3  
BT009848 AAP88850 P35236 EC 3.1.3.48
D11327 BAA01946 P35236 EC 3.1.3.48
AK127214 BAG54453 B3KXE1  
AK293186 BAG56727 B4DDG6  
AK301051 BAG62662 B4DVF0  
AK301757 BAG63218 B4DX06  
AK301980 BAG63388 B4DXH6  
AK302869 BAG64051 B4DZD9  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPN7 NP_542155 M.musculus Ptpn7 320139 Gene Info NP_796055 92
R.norvegicus Ptpn7 246781   NP_663716 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta

Kegg Pathways
Pathway information courtesy of Kegg


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.