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Gene Info

Gene Information For:Hs. SF3B2, Splicing factor 3b, subunit 2, 145kDa
Sequence ID:NM_006842

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 65576407 - 65592875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3351485Full LengthBC007610splicing factor 3b, subunit 2, 145kDa
2822659IncompleteBC000401splicing factor 3b, subunit 2, 145kDa
4478742IncompleteBC053577splicing factor 3b, subunit 2, 145kDa
4562562IncompleteBC014125splicing factor 3b, subunit 2, 145kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006833  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_006842 NP_006833 Q9BWD2 SAP
DUF382
PSP

Related Sequences

 
mRNAGenPeptSwissProt
U41371 AAA97461 Q13435
BC000401 AAH00401 Q9BWD2
BC007610 AAH07610 Q7L4T5
BC014125 AAH14125 Q96CM6
BC053577 AAH53577 Q7Z627
AK290850 BAF83539 A8K485
AK300016 BAG61831 B4DT19
BX537771 CAD97834 Q7Z3K9

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SF3B2 NP_006833 M.musculus Sf3b2 319322 Gene Info NP_084385 98
R.norvegicus Sf3b2 293671   XP_215182 98
A.gambiae AgaP_AGAP006240 1276901   XP_316308 63
D.melanogaster CG3605 33514   NP_608739 63
C.elegans W03F9.10 178542   NP_503141 55
A.thaliana AT4G21660 828253   NP_193897 51
M.grisea MGG_03182 2676555   XP_360639 46
N.crassa NCU05452.1 2707184   XP_325307 45
S.pombe sap145 2541609   NP_594733 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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