Sequencing

Table of Contents

of abstracts from the
DOE Human Genome Program Contractor-Grantee Workshop VI
November 9-13, 1997, Santa Fe, NM


Home   
Author Index
Sequencing 
Table of Contents 
Abstracts   
Sequencing Technologies
Table of Contents 
Abstracts   
Mapping and Resources 
Table of Contents 
Abstracts   
Informatics 
Table of Contents
Abstracts   
Ethical, Legal, and Social Issues 
Table of Contents 
Abstracts   
Infrastructure 
Table of Contents 
Abstracts   
Ordering Information  
  • Large Scale Genomic Sequencing at Washington University
    Stephanie L. Chissoe and the Genome Sequencing Center
    Washington University School of Medicine, St. Louis, MO, USA 63108

  • The UTSW High Throughput DNA Project
    Glen A. Evans, Maria Athanasiou, Lisa Hahner, Sherri Osborne-Lawrence, Terry Franklin, Nina Federova, Cynthia English, Shelly Hinson-Cooper, Joel Dunn, James McFarland, Juan Davie, Travis Ward, Paul Card, Parul Patel, Margaret Gordon, Jackie Newton, Danny Valenzuela, Jeff Schageman, Jeff Harris, Garrett Gotway, Mathenna Syed, Ken Kufer, Peter Schilling, Vanetta Gee, Mujeeb Basit, Stafford Brignac, Odell Grant, Ron Burmeister, Kevin O'Brien, Skip Garner, and Roger Schultz
    Genome Science and Technology Center, University of Texas Southwestern Medical Center at Dallas, Texas 75235-8591

  • Progress Towards Sequencing Selected Regions of Human Chromosome 19
    Jane Lamerdin, Aaron Adamson, Karolyn Burkhart-Schultz, Linda Danganan, Jeff Garnes, Ami Kyle, Melissa Ramirez, Stephanie Stilwagen, Glenda Quan, Pat Poundstone, Robert Bruce, Evan Skowronski, Arthur Kobayashi, David Ow, Anthony V. Carrano, and Paula McCready
    Joint Genome Institute, Lawrence Livermore National Laboratory, Livermore, CA, 94550

  • Analysis of Nine Tandem Zinc Finger-Containing Genes Located within a 339kb Region in Human Chromosome 19q13.2
    Mark Shannon, Linda Ashworth, Laurie Gordon, Anne Olsen, and Lisa Stubbs
    Human Genome Center, Lawrence Livermore National Laboratory, Livermore, CA 94551

  • Genomic Sequencing of 16p13.3
    D. C. Bruce, D. O. Ricke, J. L. Longmire, P. S. White, J. M. Buckingham, L. A. Chasteen, D. L. Robinson, M. D. Jones, A. C. Munk, J. D. Cohn, A. L. Williams, M. O. Mundt, L. L. Deaven, and N. A. Doggett
    Los Alamos National Laboratory, Life Sciences Division and Center for Human Genome Studies, Los Alamos, New Mexico 87545

  • The Beginning of the End: Mapping and Sequencing Human Telomeric DNA
    Robert K. Moyzis, Han-Chang Chi, and Deborah L. Grady
    Department of Biological Chemistry, University of California, Irvine, Irvine, CA 92697

  • 7q Telomere: Complete Sequencing
    Han-Chang Chi1,2, Elizabeth H. Saunders1, Judy M. Buckingham1, Darrell O. Ricke1, A. Christine Munk1, Rebecca Lobb1, Samantha Y.-J. Ueng1, Mark O. Mundt1, P. Scott White1, Owatha L. Tatum1, and Robert K. Moyzis1,2
    1 Center for Human Genome Studies and Genomics Group, LS-3, Los Alamos National Laboratory, Los Alamos, NM 87545 and 2 Department of Biological Chemistry, College of Medicine, University of California, Irvine, Irvine, CA 92697

  • Finished Sequence of 7q Telomere Region: Features, Validation and Polymorphism Detection
    P. Scott White, Han Chi, Larry L. Deaven, Darrell O. Ricke, Elizabeth Saunders, Owatha L. Tatum, and Robert K. Moyzis
    Los Alamos National Laboratory, Life Sciences Division and Center for Human Genome Studies, Los Alamos, New Mexico 87545

  • Large-Scale High-Quality Genomic Sequencing of Human Chromosome 7
    Shawn Iadonato, Jun Yu, Gane K.-S. Wong, Charles Magness, Phil Green, and Maynard Olson
    Human Genome Center, Department of Medicine, University of Washington, Seattle, WA 98195

  • Sequencing Progress at Lawrence Berkeley National Lab and the Formation of JGI
    Chris Martin and Mohan Narla
    Human Genome Sequencing Department, Life Sciences Division, Lawrence Berkeley National Laboratory and the DOE Joint Genome Institute, Berkeley, CA

  • Comparative Analysis of Human and Mouse Orthologous DNA to Identify Conserved Regulatory Regions
    Kelly A. Frazer, Gabriela G. Cretz, Christopher H. Martin, Jan-Fang Cheng, and Edward M. Rubin
    Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720

  • Comparative Genomic Sequencing of the Human and Mouse Fibroblast Growth Factor Receptor Type III Gene
    Ana V. Perez-Castro, Julie Wilson, Cleo Naranjo, and Michael R. Altherr
    Los Alamos National Laboratory, Genomics Group, Los Alamos, New Mexico 87545

  • Comparative Genomic Sequencing of the Murine Syntenic Segments Corresponding to Human Chromosome 16p13.3
    Darrell O. Ricke, Norman A. Doggett and Michael R. Altherr
    Los Alamos National Laboratory, Genetics Group, Los Alamos, New Mexico 87545

  • High-Throughput Sequencing of Eubacterial and Archeal Genomes
    Owen White, Mark D. Adams, Rebecca Clayton, Hans-Peter Klenk, Anthony R. Kerlavage, Karen E. Nelson, J. Craig Venter
    The Institute for Genomic Research

  • High-Throughput Transposon Mapping and Sequencing
    Robert B.Weiss1, Mark Stump1, Joshua Cherry1, Cindy Hamil1, Frank Robb2 and Diane Dunn1
    1 Department of Human Genetics, University of Utah, Salt Lake City, UT 84112, 2Center of Marine Biotechnology, University of Maryland, Baltimore, MD 21202.

  • Complete Sequencing of the 2.3Mbp Genome of the Hyperthermophilic Pyrobaculum aerophilum
    Sorel Fitz-Gibbon1, Ung-Jin Kim2, Heidi Ladner1, Yongweo Cao2, Gony H. Kim2, Barbara Perry2, Enrique Colayco2, Ronald V. Swanson3, Terry Gaasterland4, Jeffrey H. Miller1, and Melvin I. Simon2
    1 Department of Microbiology and Molecular Genetics, and Molecular Biology Institute, University of California, Los Angeles
    2 Biology, California Institute of Technology
    3 Now at Diversa Corp., San Diego
    4 Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL; Department of Computer Science, University of Chicago, Chicago, IL

  • Microbial Genome Sequencing and Comparative Analysis
    D.R. Smith, T. Aldredge, R. Bashirzadeh, H. Bochner, M. Boivin, S. Bross, D. Bush, A. Caron, A. Caruso, G. Church*, R. Cook, C.J. Daniels#, C. Deloughery, L. Doucette-Stamm, J. Dubois, J. Egan, D. Ellston, J. Ezedi, T. Ho, K. Holtham, P. Joseph, M. LaPlante, H-M. Lee, D. Blakely, R. Cook, R. Gibson, K. Gilbert, A. Goyal, J. Guerin, D. Harrison, J. Hitti, L. Hoang, N. Jiwani, P. Keagle, J. Kozlovsky, W. Lumm, J. Mao, P. Mank, A. Majeski, S. McDougall, J. Nölling, D. Patwell, J. Phillips, S. Pietrokovski@, B. Pothier, S. Prabhakar, D. Qiu, J.N. Reeve#, P. Rice, P. Richterich, M. Rossetti, M. Rubenfield, M. Sachdeva, H. Safer, G. Shimer, P. Snell, R. Spadafora, L. Spitzer, H-U. Thomann, R. Vicaire, Y.Wang, L.Wong, K. Weinstock, J. Wierzbowski, Q. Xu, L. Zhang
    Genome Therapeutics Corp., Waltham, MA
    *HHMI, Dept. of Genetics, Harvard Medical School, Boston, MA
    @Fred Hutchinson Cancer Research Center, Seattle, WA
    #Dept. of Microbiology, The Ohio State University, Columbus OH

  • Sequencing the Borrelia burgdorferi Genome
    John J. Dunn, Laura-Li Butler-Loffredo, Ting Chen, William C. Crockett, Jan Kieleczawa, Jeremy Medalle, Sean McCorkle, Keith H. Thompson, Jeanne R. Wysocki, Shiping Zhang and F. William Studier
    Biology Department, Brookhaven National Laboratory, Upton, New York 11973

  • Sequence Analysis of the Plasmids of Bacillus anthracis
    R. T. Okinaka, K. G. Cloud, O. A. Hampton, K. K. Hill, P. Keim, S. Kumano, D. Manter, J. J. Renouard, D. O. Ricke, and P. J. Jackson
    Los Alamos National Laboratory, Life Sciences Division, Los Alamos, New Mexico 87545 and Northern Arizona University, Flagstaff, Arizona

  • Contribution to Sequencing of the Deinococcus radiodurans Genome
    Michael J. Daly and Kenneth W. Minton
    Department of Pathology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814-4799

  • Sequencing of Three Plasmids Encoding Virulence Determinants in Yersinia Pestis
    P. Hu, J. Elliott, P. Mc Cready, E. Skowronski, A. Adamson and E. Garcia
    Human Genome Center, Biology and Biotechnology Research Program, Lawrence Livermore National Laboratory, Livermore, CA 94550