Identification of Transcribed Sequences: Functional and Expression Analysis: November 1997

Abstract Table of Contents

• Gene function: A model for the representation of gene function in a database, FlyBase
  Michael Ashburner
• Development of libraries enriched for full-length cDNAs: A progress report
  Maria de Fatima Bonaldo, Kala Mayur and Marcelo Bento Soares
• Database-assisted large scale polymorphism finding and exploitation
  Anthony J. Brookes
• Gene identification in sequenced DNA: Database searches, gene predictions and verification by RT-PCR, Northern blots, and exon trapping
  J.T. Den Dunnen, I. Stec, E. Van De Vosse, D. Jennen and G.J.B. Van Ommen
• Expression mapping of mouse genes
  Tom Freeman
• Gene discovery in AT-rich regions of human chromosome 21 and correlation of base composition with compaction in Fugu rubripes homologous genes
  Katheleen Gardiner
• Attaching functional annotation to predicted genes in genomic sequences
  Roderic Guigo
• Development and use of the reverse two-hybrid system to characterize interactions between c-Rel and its inhibitor, IkBa
  Mark Hannink
• An automated digital technology for analyzing expression of nearly all genes
  Karl W. Hasel, Brian S. Hilbush, Elizabeth A. Thomas, Jayson Durham, and J. Gregor Sutcliffe
• FDD, a high-throughput message display system for the functional interpretation of yeast and mammalian genomes
  Takashi Ito
• Reverse genetics by chemical mutagenesis in C. elegans
  Gert Jansen, Karen L. Thijssen, Esther Hazendonk, Marieke van der Horst and Ronald H.A. Plasterk
• EPODB: A bioinformatics system for the analysis of gene expression during erythropoiesis
  A. Kel, O. Kel, N. Kolchanov, J. Schug, C. Stoeckert
• Expression pattern map of the C. elegans genome
  Yuji Kohara
• X chromosome cDNA library: Generation, evaluation, and application in transcriptional mapping
  B.Korn
• mRNA architecture and cascade of gene expression
  Wai-Choi Leung
• Functional studies of coding and non-coding sequences of zebrafish genome
  Shuo Lin
• A report on the Drosophila EST project
  Suzanna Lewis
• Comparative mapping in the search for the ovine Booroola mutation
  Eric. A. Lord, Joanne M. Lumsden, Mike L. Tate, Catherine Y.Y. Liu, Dean J. Burkin and Grant W. Montgomery
• Isolation and characterization of a novel human gene, hsUFD2, located in the neuroblastoma critical region on chromosome 1p36.3
  Barbora Lubyova, Ute Willhoeft, Patrick Onyango, Judith A. Lummerstorfer and Andreas Weith
• Analysis of differentially expressed genes using a solid-phase RDA approach
  Joakim Lundeberg
• Functional genomics of the flightless region of Drosophila: Implications for genome projects and human diseases
  R. Maleszka, H.G. de Couet, G.C. Webb, George L.Gabor Miklos
• Automated annotation of genomic DNA sequence: The Genome Channel
  Richard J. Mural, and the DOE Annotation Consortium
• Simulation of genetic regulatory circuits
  Harley McAdams
• Identification of ANF as a stroke-susceptibility gene by positional expression cloning using quantitative expression analysis
  Michael P. McKenna, Gregory T. Went, Jonathan M. Rothberg, Stephen F. Kingsmore
• Phenotypic dissection of complex traits in mice: risk factors, expression profiles, physiological and developmental pathways, and models for human genetic diseases
  J. Nadeau
• Quantitative analysis of differentially expressed cDNA between normal and deficient thymus lead to the identification of novel functional genes
  Catherine Nguyen, Philippe Naquet and Bertrand Jordan
• A bacterial artificial chromosome expression system for scanning large DNA segments for functional elements: Application in neuroblastoma
  Patrick Onyango
• Utilisation of YACs as expression vectors to create or correct pathological phenotypes
  E.Passage, Z.Assouline, D.Sabéran-Djoneidi, M.Fontés
• GeneUP: A program to select short PCR primer pairs that occur in multiple members of sequence lists
  Graziano Pesole, S Liuni, G. Grillo, Pierre Belichard, Thomas Trenkle, and Michael McClelland
• Structural and compositional features of untranslated regions of eukaryotic mRNAs
  Graziano Pesole
• SEX Trap: A novel method for the identification of signal sequence-containing genes from cytokine clusters
  Miklós Péterfy, Tibor Gyuris, and László Takács
• Characterization of a novel anonymous gene in 22q12.2-12.3, a region deleted in sporadic meningiomas
  Myriam Peyrard
• A linkage map of zebrafish transcribed sequences and the evolution of the vertebrate genome
  John H. Postlethwait
• Growth failure in idiopathic short stature and Turner syndrome is caused by haploinsufficiency of a pseudoautosomal homeobox gene
  Ercole Rao, Birgit Weiss, Beate Niesler, Maki Fukami, Tsutomu Ogata and Gudrun A. Rappold
• Gene expression resource for the laboratory mouse
  M. Ringwald, R. Baldock, J. Bard, D. Begley, G. Davis, D. Davidson, J.T. Eppig, K. Frazer, M. Kaufman, M. Mangan, J. Richardson, L. Trepanier
• Use of cDNA microarrays for analysis of gene expression for thousands of genes simultaneously
  D.T.Ross, M.Eisen, D. Lashkari, G. Shuler, M. Boguski, J. Hudson, D. Botstein, D. Shalon, P.O. Brown
• S. cerevisiae , lacZ., lox , in vivo Functional analysis of the S. cerevisiae genome: The Transposon Insertion Project, The Genome Deletion Project
  Petra Ross-Macdonald, S. Agarwal, R. Bangham, H. Liao, A. Sheehan, D. Symonaitis, L. Umansky, G.S. Roeder, and M. Snyder
• Chromosome 3q breakpoints in leukemia: Complexities in alterntive processing and intergenic splicing
  Alla Rynditch
• Evolutionary history of genes from the G6PD region of human Xq28: Insights from the analysis of human; fugu and amphioxus homologues
  Z. Sedlacek, E. Steck, J. Coy, and A. Poustka
• RNA editase genes from Fugu rubripes
  Dobrimir Slavov
• Analysis of the chicken genome by means of a sequence sampling approach
  J. Smith, R.I. Paton, C. Bruley, A.S. Law, and D.W. Burt
• Comparative analysis and genomic structure of the ataxia telangiectasia gene in human and pufferfish and characterization of some founder mutations
  Udar N.S., Morrison A., Telatar M., Cisler A., Amemiya C., Concannon P., Wang Z., Liang T., Chun H., Small K., and Gatti R.A.
• Prediction of muscle-specific gene expression: The actin promoter model
  Thomas Werner
• Generation and sequencing of full length cDNAs in the course of the German Genome Project
  Stefan Wiemann, Bernhard Korn, Annemarie Poustka
• Whole-genome duplication during yeast evolution and its (ir)relevance to other organisms
  Kenneth H. Wolfe, Cathal Seoighe, Denis C. Shields, Colin A.M. Semple, Lucy Skrabanek
• Structure/function analysis of vertebrate Na+/H+ exchanger genes and their role in control of cell volume
  C.Wright
• Identification of consensus elements in 3'UTRs
  Gayle E. Woloschak
• Genomic sequence analysis of a gene-dense region on Chromosome 21q22.3 and comparison with the existing transcript map: The emerging gene organization
  Marie-Laure Yaspo
• The mouse Sry interactive proteins are differentially expressed in adult and fetal tissues
  J.Q. Zhang, P. Coward, M.W. Xian and Y-FC. Lau
• Linking human proteins using two-hybrid technology
  Li Zhu