 |
| Year 2008 | Back to top |
| A Balanced Approach to Health Information Evaluation: A Vocabulary-based Naive Bayes Classifier and Readability Formulas |
Leroy G, Miller T, Rosemblat G, Browne A
|
| In Journal of the American Society for Information Science and Technology (JASIST), 59(9):1409-1419, 2008 |
| (Abstract) |
|
| Accessing and Integrating Data and Knowledge for Biomedical Research |
|
|
| Geissbuhler A, Kulikowski C, editors. IMIA Yearbook of Medical Informatics 2008. Methods Inf Med 2008;47(Suppl 1):91-99 |
| (Abstract) (PDF)
(PMID: 18660883
) |
|
| A Framework for Characterizing Drug Information Sources |
Sharp M, Bodenreider O, Wacholder N
|
| AMIA Annu Symp Proc 2008:662-666 |
| (Abstract) (PMID: 18999182
) |
|
| A Method for Verifying a Vector-Based Text Classification System |
Lu CJ, Humphrey SM, Browne AC
|
| AMIA Annu Symp Proc. 2008 Nov 6 |
| (Abstract) |
|
| An Effective Computerized Reminder for Contact Isolation of Patients Colonized or Infected with Resistant Organisms |
Kho AN, Dexter PR, Warvel JS, Belsito AW, Commiskey M, Wilson SJ, Hui SL, McDonald CJ
|
| ijmedinf 77 (2008) 194-198 |
| (Abstract) (PMID: 17398145
) |
|
| An Ontology-driven Semantic Mash-up of Gene and Biological pathway information: Application to the domain of nicotine dependence |
Sahoo SS, Bodenreider O, Rutter JL, Skinner KJ, Sheth AP
|
| Journal of Biomedical Informatics 2008 |
| (Abstract) (PMID: 18395495
) |
|
| A Normalized Lexical Lookup Approach to Identifying UMLS Concepts in Free Text |
Bashyam V, Bennett DB, Browne AC, Taira RK
|
| Stud Health Technol Inform. 2007;129(Pt 1):545-9 |
| (Abstract) (PMID: 17911776
) |
|
| An Update on Uniform Resource Locator (URL) Decay in MEDLINE Abstracts and Measures for Its Mitigation |
Ducut E, Liu F, Fontelo P
|
| BMC Med Inform Decis Mak. 2008 Jun 11;8:23 |
| (Abstract) (PMID: 18547428
) |
|
| A Spine X-Ray Image Retrieval System Using Partial Shape Matching |
Xu X, Lee DJ, Antani S, Long LR
|
| IEEE Transactions on Information Technology in Biomedicine. January 2008;12(1):100-8 |
| (Abstract) (PMID: 18270042
) |
|
| A Stable Optic-flow Based Method for Tracking Colonoscopy Images |
Liu J, Subramanian K, Yoo T, Van Uitert R
|
| Proc. of MMBIA 2008: IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis, W. Wells, T. Syeda-Mahmood, B. Vemuri, and F. Wang, eds. (27-28 June 2008, Anchorage, AK) |
| (Abstract) |
|
| Auditing the NCI Thesaurus with Semantic Web Technologies |
|
|
| Auditing the NCI thesaurus with Semantic Web technologies |
| (Abstract) (PDF)
(PMID: 18999265
) |
|
| Automatic Categorization of Google Search Results for Medical Queries using JDI |
Bangalore AK, Divita G, Humphrey SM, Browne AC, Thorn KE
|
| Medinfo 2007: Proc. of the 11th World Congress on Health (Medical) Informatics |
| (Abstract) |
|
| Automatic Inference of Indexing Rules for MEDLINE |
Neveol A, Shooshan SE, Claveau V
|
| BMC Bioinformatics. 2008 Nov 19;9 Suppl 11:S11 |
| (Abstract) (PMID: 19025687
) |
|
| Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System |
Mougin F, Burgun A, Bodenreider O, Chabalier J, Loreal O, Le Beux P
|
| Proceedings of the Fifth International Workshop on Data Integration in the Life Sciences (DILS 2008). Berlin Heidelberg New York: Springer; 2008. p. 61-76 |
| (Abstract) (PDF)
|
|
| Automatic Summarization of MEDLINE Citations for Evidence-based Medical Treatment: A Topic-oriented Evaluation |
Fiszman M, Demner-Fushman D, Kilicoglu H, Rindflesch TC
|
| J Biomed Inform. 2008 Nov 5 |
| (Abstract) (PMID: 19022398
) |
|
| A Web-accessible Content-based Cervicographic Image Retrieval System |
Xue Z, Long R, Antani SK, Thoma GR
|
| Proc. SPIE Medical Imaging 2008. April 2008;6919:691907-1-9 |
| (Abstract) |
|
| Balancing the Role of Priors in Multi-Observer Segmentation Evaluation |
Zhu Y, Huang X, Wang W, et al
|
| J Sign Process Syst. New York, NY. May 2008 |
| (Abstract) |
|
| Beyond Surface Characteristics: A New Health Text-specific Readability Measurement |
Kim H, Goryachev S, Rosemblat G, Browne A, Keselman A, Zeng-Treitler Q
|
| AMIA Annu Symp Proc. 2007 Oct 11:418-22 |
| (Abstract) (PMID: 18693870
) |
|
| Biomedical Ontologies in Action: Role in Knowledge Management, Data Integration and Decision Support |
|
|
| Geissbuhler A, Kulikowski C, editors. IMIA Yearbook of Medical Informatics 2008. Methods Inf Med 2008;47(Suppl 1):67-79 |
| (Abstract) (PMID: 18660879
) |
|
| Bridging the Gap: Enabling CBIR in Medical Applications |
Antani S, Long LR, Thoma GR
|
| Proc. 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS). Jyvaskyla, Finland. June 2008:4-6 |
| (Abstract) (PDF)
|
|
| CBIR of Spine X-ray Images on Inter-vertebral Disc Space and Shape Profiles |
Chang Y, Antani S, Lee DJ, et al
|
| Proc. 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS). Jyvaskyla, Finland. June 2008:224-9. |
| (Abstract) (PDF)
|
|
| Combining Medical Domain Ontological Knowledge and Low-level Image Features for Multimedia Indexing |
Demner-Fushman D, Antani SK, Simpson M, Thoma GR
|
| Proceedings of 2nd International Language Resources for Content-Based Image Retrieval Workshop (OntoImage 2008), part of 6th Language Resources and Evaluation Conference (LREC 2008). Marrakech, Morrocco. May 2008:CDROM Proceedings |
| (Abstract) (PDF)
|
|
| Combining Medical Domain Ontological Knowledge and Low-level Image Features for Multimedia Indexing |
Demner-Fushman D, Antani SK, Simpson M, Thoma GR
|
| Proc. 2nd Int'l Language Resources for Content-Based Image Retrieval Workshop (OntoImage 2008), part of 6th Language Resources and Evaluation Conference (LREC 2008). Marrakech, Morrocco. May 2008:CDROM Proceedings |
| (Abstract) |
|
| Comparing SNOMED CT and the NCI Thesaurus through Semantic Web Technologies |
|
|
| Proc. KR-MED 2008 |
| (Abstract) |
|
| Design and Implementation of a Personal Medication Record - MyMedicationList |
Zeng K, Bodenreider O, Nelson SJ
|
| AMIA Annu Symp Proc 2008:844-848 |
| (Abstract) (PDF)
(PMID: 18998962
) |
|
| Do Computer-generated Summaries, 'The Bottom Line (TBL)' Accurately Reflect Published Journal Abstracts? |
|
|
| AMIA Annu Symp Proc. 2007 Oct 11:1135 |
| (Abstract) (PMID: 18694232
) |
|
| Essie: a concept-based search engine for structured biomedical text |
Ide NC, Loane RF, Demner-Fushman D
|
| J Am Med Inform Assoc. 2007 May-Jun;14(3):253-63. Epub 2007 Feb 28 |
| (Abstract) (PMID: 17329729
) |
|
| Evaluation of Linear Array Human Papillomavirus Genotyping Using Automatic Optical Imaging Software |
Jeronimo J, Wentzensen N, Long R, et al
|
| Journal of Clinical Microbiology. August 2008;46(8):2759-65 |
| (Abstract) (PMID: 18550741
) |
|
| Exploring use of Images in Clinical Articles for Decision Support in Evidence-Based Medicine |
Antani SK, Demner-Fushman D, Li J, Srinivasan BV, Thoma GR
|
| Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150Q(1-10) |
| (Abstract) (PDF)
|
|
| Extending the Benefits of One Laptop per Child to Health |
Fontelo P, Liu F, Zhang K, Ackerman M
|
| BMJ. 2008 Dec 1;337:a2459. doi: 10.1136/bmj.a2459 |
| (Abstract) (PMID: 19047193
) |
|
| Extracting a Sparsely-Located Named Entity from Online HTML Medical Articles Using Support Vector Machine |
|
|
| Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:6815OP(1-10) |
| (Abstract) |
|
| Heterogeneous but 'Standard' Coding Systems for Adverse Events: Issues in Achieving Interoperability Between Apples and Oranges |
Richesson RL, Fung KW, Krischer JP
|
| Contemp Clin Trials. 2008 Sep;29(5):635-45. Epub 2008 Mar 5 |
| (Abstract) (PMID: 18406213
) |
|
| Hybrid Approach Combining Contextual and Statistical Information for Identifying MEDLINE Citation Terms |
|
|
| Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150P(1-9) |
| (Abstract) (PDF)
|
|
| Identifying Risk Factors for Metabolic Syndrome in Biomedical Text |
Fiszman M, Rosemblat G, AhlersCB, Rindflesch TC
|
| AMIA Annu Symp Proc. 2007 Oct 11:249-53 |
| (Abstract) (PMID: 18693836
) |
|
| Issues in Mapping LOINC Laboratory Tests to SNOMED CT |
|
|
| AMIA Annu Symp Proc 2008:51-55 |
| (Abstract) (PMID: 18999311
) |
|
| Leveraging Semantic Knowledge in IRB Databases to Improve Translation Science |
Hurdle JF, Botkin J, Rindflesch TC
|
| AMIA Annu Symp Proc. 2007 Oct 11:349-53 |
| (Abstract) (PMID: 18693856
) |
|
| Live Wire Segmentation Tool for Osteophyte Detection in Lumbar Spine X-Ray Images |
Seetharaman S, Stanley RJ, De S, et al
|
| Proc of 1st IEEE International Conference on Emerging Trends in Engineering and Technology (ICETET 2008). Nagpur, India. July 2008:715-20 |
| (Abstract) |
|
| Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing |
Aronson AR, Mork JG, Shooshan SE, Demner-Fushman D
|
| AMIA Annu Symp Proc. 2008 Nov 6:21-5 |
| (Abstract) (PMID: 18998883
) |
|
| Mobile Devices in Health Education: Current Use and Practice |
|
|
| J Computing in Higher Education, Fall 2008 |
| (Abstract) |
|
| Moving Towards Transparency of Clinical trials |
|
|
| Science. 2008 Mar 7;319(5868):1340-2 |
| (Abstract) |
|
| MyMedicationList: Integrating Personal Medication Records with Resources |
Nelson SJ, Zeng K, Bodenreider O
|
| AMIA Annu Symp Proc 2008:1228 |
| (Abstract) (PDF)
(PMID: 18998987
) |
|
| Naive Bayes Classifier for Extracting Bibliographic Information From Biomedical Online Articles |
|
|
| Proc. of the 2008 International Conference on Data Mining. Las Vegas, Nevada, USA. July 2008;II:373-8 |
| (Abstract) |
|
| Natural Language Processing Versus Content-Based Image Analysis for Medical Document Retrieval |
Neveol A, Deserno TM, Darmoni SJ, Guld MO, Aronson AR
|
| Journal of the American Society for Information Science and Technology 60(1):123-134, 2009 |
| (Abstract) |
|
| Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues |
|
|
| In: Bairoch A, Cohen-Boulakia S, Froidevaux C, editors. Proceedings of the Fifth International Workshop on Data Integration in the Life Sciences (DILS 2008); Berlin Heidelberg New York: Springer; 2008. p. 1-4 |
| (Abstract) (PDF)
|
|
| Ontology of Gaps in Content-Based Image Retrieval |
Deserno TM, Antani SK, Long LR
|
| Journal of Digital Imaging. February 2008 |
| (Abstract) (PMID: 18239964
) |
|
| Physician Attitudes Toward SMS/Text Messaging in Medicine |
|
|
| AMIA Annu Symp Proc. 2008 Nov 6:965 |
| (Abstract) (PMID: 18999193
) |
|
| QR Code for Medical Information Uses |
Fontelo P, Liu F, Ducut EG
|
| AMIA Annu Symp Proc. 2008 Nov 6:945 |
| (Abstract) (PMID: 18998785
) |
|
| RxTerms a Drug Interface Terminology Derived from RxNorm |
Fung KW, McDonald CJ, Bray BE
|
| AMIA Annu Symp Proc. 2008 Nov 6:227-31 |
| (Abstract) (PMID: 18998891
) |
|
| Semantic MEDLINE: A Web Application for Managing the Results of PubMed Searches |
Kilicoglu H, Fiszman M, Rodriguez A, Shin D, Ripple AM, Rindflesch TC
|
| Proc. Third Int'l Symposium for Semantic Mining in Biomedicine, 69-76 |
| (Abstract) |
|
| Semantic Processing to Support Clinical Guideline Development |
Fiszman M, Ortiz E, Bray BE, Rindflesch TC
|
| AMIA Annu Symp Proc. 2008 Nov 6:187-91 |
| (Abstract) (PMID: 18999127
) |
|
| Semantic Web for Translational Biomedicine: Two Pilot Experiments |
|
|
| Proc. MIA Summit on Translational Bioinformatics 2008:141 |
| (Abstract) (PDF)
|
|
| Size-invariant Descriptors for Detecting Regions of Abnormal Growth in Cervical Vertebrae |
Stanley RJ, Antani S, Long LR, Thoma GR, Gupta K, Das M
|
| Computerized Medical Imaging and Graphics 32 (2008) 44-52 |
| (Abstract) (PMID: 17949946
) |
|
| SNOMED CT: Browsing the Browsers |
|
|
| Proc of the Third International Conference on Knowledge Representation in Medicine (KR-MED 2008) 2008:30-36 |
| (Abstract) |
|
| Standards, Security and Usability: Experience with MyMedicationList |
Zeng K, Bodenreider O, Kilbourne J, Nelson SJ
|
| Proc. AMIA Spring Congress 2008 |
| (PDF)
|
|
| Telemedicine via Short Messaging System (SMS) in Rural Philippines |
Gavino AI, Tolentino PA, Bernal AB, Fontelo P, Marcelo Ade B
|
| AMIA Annu Symp Proc. 2008 Nov 6:952 |
| (Abstract) (PMID: 18998858
) |
|
| Testing the Scalability of a DSpace-based Archive |
Misra D, Seamans J, Thoma GR
|
| Proc. IS&T Archiving 2008. Bern, Switzerland. June 2008:36-40 |
| (Abstract) (PDF)
|
|
| The Biological Function of Some Human Transcription Factor Binding Motifs Varies with Position Relative to the Transcription Start Site |
Tharakaraman K, Bodenreider O, Landsman D, Spouge JL, Marino-Ramirez
|
| Nucleic Acids Res 2008;36(8):2777-2786 |
| (Abstract) (PMID: 18367472
) |
|
| The Cost of Being Wireless: A Usage Analysis of the PubMed for Handhelds Portal at the Point-of-Care |
Ducut EG, Liu F, Fontelo P
|
| AMIA Annu Symp Proc. 2008 Nov 6:936 |
| (Abstract) (PMID: 18998780
) |
|
| The Impact of Directionality in Predications on Text Mining |
Leroy G, Fiszman M, Rindflesch TC
|
| Hawaii International Conference on System Sciences (HICSS-41), January 2008 |
| (Abstract) |
|
| Tissue Classification using Cluster Features for Lesion Detection in Digital Cervigrams |
Huang X, Wang W, Xue Z, Antani SK, et al
|
| Proc. SPIE Medical Imaging 2008. April 2008;6914:69141Z-1-8 |
| (Abstract) (PDF)
|
|
| Toward Automatic Recognition of High Quality Clinical Evidence. |
Kilicoglu H, Demner-Fushman D, Rindflesch TC, Wilczynski NL, Haynes RB
|
| AMIA Annu Symp Proc. 2008 Nov 6:368 |
| (Abstract) (PMID: 18998881
) |
|
| Towards Automatic Recognition of Scientifically Rigorous Clinical Research Evidence |
Kilicoglu H, Demner-Fushman D, Rindflesch TC, Wilczynski NL, Haynes RB
|
| J Am Med Inform Assoc. 2009 Jan-Feb;16(1):25-31. Epub 2008 Oct 24 |
| (Abstract) (PMID: 18952929
) |
|
| Using the Literature-based Discovery Paradigm to Investigate Drug Mechanisms |
Ahlers CB, Hristovski D, Kilicoglu H, Rindflesch TC
|
| AMIA Annu Symp Proc. 2007 Oct 11:6-10 |
| (Abstract) (PMID: 18693787
) |
|
| Using the RxNorm Web Services API for Quality Assurance Purposes |
|
|
| AMIA Annu Symp Proc 2008:591-595 |
| (Abstract) (PMID: 18999038
) |
|
| Web-based Multi-observer Segmentation Evaluation Tool |
Zhu Y, Huang X, Lopresti D, Long R, et al
|
| Proc. 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS). Jyvaskyla, Finland. June 2008:167-9 |
| (Abstract) |
|
| |
|
| Year 2007 | Back to top |
| Advancing Translational Research with the Semantic Web |
Ruttenberg A, Clark T, Bug W, Samwald M, Bodenreider O, Chen H, et al
|
| BMC Bioinformatics 2007;8(Suppl 3):S2. |
| (Abstract) (PDF)
|
|
| A Lightweight Statistics Package for Interactive Publications |
Simpson M, Ford G, Antani S, Demner-Fushman D, Thoma GR
|
| Poster at 20th NIH Research Festival (TECH-15), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| Aligning Anatomical Ontologies: The Role of Complex Structural Rules |
Zhang S, Bodenreider O, Kantz N
|
| IIAS-Transactions on Systems Research and Cybernetics - Proceedings of the 18th International Conference on Systems Research, Informatics and Cybernetics (InterSymp 2006) 2006;VI(2):27-32. |
| (Abstract) (PDF)
|
|
| A Multidiscipline Conceptual Framework for Consumer Health Informatics |
|
|
| Medinfo 2007 12 (Pt2):1169-1173. |
| (Abstract) (PDF)
|
|
| An Evaluation of the Usability of Accessing MEDLINE over Short Messaging System |
|
|
| MEDINFO 2007:235-236 |
| (Abstract) (PDF)
|
|
| An Experiment in Integrationg Large Biomedical Knowledge Resources with RDF: Application to Associating Genotype and Phenotype Information |
Sahoo S, Bodenreider O, Zeng K, Sheth AP
|
| Proceedings of the workshop on Health Care and Life Sciences Data Integration for the Semantic Web at the 16th International World Wide Web Conference (WWW2007) (electronic proceedings: http://www2007.org/workshops/paper_149.pdf) |
| (Abstract) (PDF)
|
|
| Answering Clinical Questions with Knowledge-based and Statistical Techniques |
|
|
| Computational Linguistics. 2007 Jan;33(1):63-103 |
| (Abstract) (PDF)
|
|
| Archiving a Historic Medico-legal Collection: Automation and Workflow Customization |
Misra D, Mao S, Rees J, Thoma GR
|
| Proc. IS&T Archiving 2007. Arlington, Virginia, May 2007; 157-61. |
| (Abstract) (PDF)
|
|
| A Spine X-ray Image Retrieval System using Partial Shape Matching |
Xu X, Lee DJ, Antani S, Long LR
|
| To appear in IEEE Transactions on Information Technology in Biomedicine. 2007 |
| (Abstract) (PDF)
|
|
| Assessing Consumer Health Vocabulary Familiarity: An Exploratory Study |
Keselman A, Tse T, Crowell J et al
|
| J Med Internet Res. 2007 Mar 14;9(1):e5 |
| (Abstract) (PDF)
|
|
| A UMLS-based Spell Checker for Natural Language Processing in Vaccine Safety |
Tolentino HD, Matters MD, Walop W, Law B, Tong W, Liu F, Fontelo P, Kohl K, Payne DC
|
| BMC Medical Informatics and Decision Making 2007, 7:3 |
| (Abstract) (PDF)
|
|
| Automatically Finding Images for Clinical Decision Support |
Demner-Fushman D, Antani S, Thoma GR
|
| To appear in Proceedings of IEEE International Workshop on Data Mining in Medicine (DM-Med 2007). Omaha, NE, October 2007, pp. 139-144. |
| (Abstract) (PDF)
|
|
| Automatic Evaluation of Uterine Cervix Segmentations |
Lotenberg S, Gordon S, Long LR, Antani SK, Jeronimo J, Greenspan H
|
| Proc. SPIE Medical Imaging 2007. Vol. 6515: 65151J-1-12. |
| (Abstract) (PDF)
|
|
| Automatic Indexing of Specialized Documents: Using Generic vs. Domain-Specific Document Representations |
Neveol A, Mork JG, Aronson R
|
| Proc BioNLP 2007 Workshop, 183-92. |
| (Abstract) (PDF)
|
|
| BabelMeSH2 and PICO Linguist2: Combined Language Search for MEDLINE/PubMed |
Liu F, Fontelo P, Ackerman M
|
| AMIA Annu Symp Proc; 2007;1036 |
| (Abstract) (PDF)
|
|
| Challenges in Automated Detection of Cervical Intraepithelial Neoplasia |
Srinivasan Y, Nutter BS, Mitra SD, Yang S, Phillips B, Long LR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6514: 65140F-1-11. |
| (Abstract) (PDF)
|
|
| Clinical, Classroom or Personal Education: Attitudes About Health Literacy |
|
|
| JMLA 95:2 (April 2007): 127-137. |
| (Abstract) (PDF)
|
|
| Clinical Ontologies for Discovery Applications |
Lussier YA, Bodenreider O
|
| In: Baker CJO, Cheung K-H, editors. Semantic Web: Revolutionizing knowledge discovery in the life sciences. New York: Springer; 2007. p. 101-119. |
| (Abstract) (PDF)
|
|
| Co-evolutionary Rates of Functionally Related Yeast Genes |
Marino-Ramirez L, Bodenreider O, Kantz N, Jordan IK
|
| Evolutionary Bioinformatics Online 2006;2:295-300. |
| (Abstract) (PDF)
|
|
| Combining Lexical and Semantic Methods of Inter-terminology Mapping Using the UMLS |
Fung KW, Bodenreider O, Aronson AR, Hole WT, Srinivasan S
|
| Medinfo 2007:605-609. |
| (Abstract) (PDF)
(PMID: 17911788
) |
|
| Combining Resources to Find Answers to Biomedical Questions |
Demner-Fushman D, Humphrey SM, Ide NC, Loane RF, et al
|
| Proc TREC 2007, 205-14 |
| (Abstract) (PDF)
|
|
| Combining Static Classifiers and Class Syntax Models for Logical Entity Recognition in Scanned Historical Documents |
Mao S, Mansukhani P, Thoma GR
|
| Proc. IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Minneapolis, Minnesota, June 2007, pp. 1-8. |
| (Abstract) (PDF)
|
|
| Comparative Performance Analysis of Cervix ROI Extraction and Specular Reflection Removal Algorithms for Uterine Cervix Image Analysis |
Xue Z, Antani SK, Long LR, Thoma GR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6512: 65124I-1-9. |
| (Abstract) (PDF)
|
|
| Comparing Two Approaches for Aligning Representations of Anatomy |
Zheng S, Mork P, Bodenreider O, Bernstein PA
|
| Artificial Intelligence in Medicine 2007;39(3):227-236. |
| (Abstract) (PDF)
|
|
| Construction of Korean Version PICO Linguist and BabelMeSH |
Jung B, Lee S, Fontelo P, Liu F, Kim S
|
| Korean Society of Medical Informatics (KOSMI) Fall Congress Proceedings 2007 |
| (Abstract) (PDF)
|
|
| Cryoelectron Tomographic Analysis of an HIV-neutralizing Protein and Its Complex with Native Viral gp120 |
Bennett A, Liu J, Van Ryk D, Bliss D, Arthos J, Henderson RM, Subramaniam S
|
| J Biol Chem. 2007 Sep 21;282(38):27754-9. Epub 2007 Jun 28. |
| (Abstract) (PDF)
|
|
| Do Computer-generated Summaries, 'The Bottom Line (TBL)' Accurately Reflect Published Journal Abstracts? |
|
|
| AMIA Annu Symp Proc; 2007;1135 |
| (Abstract) (PDF)
|
|
| Essie: A Concept-based Search Engine for Structured BiomedicalText |
Ide NC, Loane RF, Demner-Fushman D
|
| J Am Med Inform Assoc 2007;14(3):253-263. |
| (Abstract) (PDF)
|
|
| Evidence-based Medicine Among Internal Medicine Residents in a Community Hospital Program Using Smart Phones |
Leon SA, Fontelo P, Green L, Ackerman M, Liu F
|
| BMC Medical Informatics and Decision Making 2007, 7:5 |
| (Abstract) (PDF)
|
|
| Experience in Aligning Anatomical Ontologies |
|
|
| International Journal on Semantic Web and Information Systems 2007;3(2):1-26. |
| (Abstract) (PDF)
|
|
| Experience in Integrating Large RDF-based Biomedical Knowledge Resources with Oracle |
|
|
| Proceedings of the 8th International Oracle Life Sciences User Group Meeting 2007:(electronic proceedings: http://www.olsug.org/wiki/images/d/d1/Kelly_Zheng.pdf) |
| (Abstract) (PDF)
|
|
| Exploring Access to Scientific Literature Using Content-Based Image Retrieval |
Deserno TM, Antani SK, Long LR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6516: 65160L-1-8. |
| (Abstract) (PDF)
|
|
| Extracting Semantic Predications from MEDLINE Citations for Pharmacogenomics |
Ahlers C, Fiszman M, Demner-Fushman D, Lang F, Rindflesch TC
|
| Pacific Symposium on Biocomputing 2007 12:209-220 |
| (Abstract) (PDF)
|
|
| Extractive Summarization in Clinical Trials Protocol Summaries: A Case Study |
Rosemblat G, Graham L, Tse T
|
| In: Proceedings, 3rd Indian International Conference on Artificial Intelligence (IICAI-2007), pp. 1824-1837 |
| (Abstract) (PDF)
|
|
| Fine-Grained Indexing of the Biomedical Literature: MeSH Subheading Attachment for a MEDLINE Indexing Tool |
Neveol A, Shooshan SE, Mork JG, Aronson AR
|
| AMIA Annu Symp Proc. 2007;:553-7 |
| (Abstract) (PDF)
|
|
| From 'Glycosyltransferase' to 'Congenital Muscular Dystrophy': Integrating Knowledge from NCBI Entrez Gene and the Gene Ontology |
Sahoo SS, Zeng K, Bodenreider O, Sheth A
|
| MEDINFO 2007:1260-1264 |
| (Abstract) (PDF)
|
|
| From Indexing the Biomedical Literature to Coding Clinical Text: Experience with MTI and Machine Learning Approaches |
Aronson AR, Bodenreider O, Demner-Fushman D, Fung KW, Lee VK, Mork JG, Neveol A, Peters L, Rogers WJ
|
| Proc. 2007 Workshop on Biomedical Natural Language Processing (BioNL'07), June 2007, pp. 105-112, Prague, Czech Republic. |
| (Abstract) (PDF)
|
|
| Gaps in Content-Based Image Retrieval |
Deserno TM, Antani SK, Long LR
|
| Proc. SPIE Medical Imaging 2007. Vol. 6516: 65160J-1-11. |
| (Abstract) (PDF)
|
|
| Geographically Distributed Complementary Content-Based Image Retrieval Systems for Biomedical Image Informatics |
Antani SK, Deserno TM, Leon S, Long LR, Thoma GR
|
| MEDINFO August 2007, pp. 493:7 |
| (Abstract) (PDF)
|
|
| Hybrid Alignment Strategy for Anatomical Ontologies Results of the 2007 Ontology Alignment Contest |
|
|
| Proc. OAEI 2007:139-149. |
| (Abstract) (PDF)
|
|
| Identification and Segmentation of Multi-Panel Images in Biomedical Journal Articles |
Srinivasan B, Antani S, Demner-Fushman D, Thoma GR
|
| Poster at 20th NIH Research Festival (BIOINFO-1), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| Identification of 'comment-on sentences' in Online Biomedical Documents Using Support Vector Machines |
|
|
| Proc. SPIE conference on Document Recognition and Retrieval, vol. 6500, pp.65000O-1-65000O-8, San Jose, CA, January 2007 |
| (Abstract) (PDF)
|
|
| Identifying Mismatches in Alignments of Large Anatomical Ontologies |
|
|
| Proc AMIA Annu Symp; 2007:851-855 |
| (Abstract) (PDF)
|
|
| Integrating the UMLS into an RDF-Based Biomedical Knowledge Repository |
|
|
| Proc AMIA Annu Symp; 2007:1170 |
| (Abstract) (PDF)
|
|
| Interfacing Global and Local CBIR Systems for Medical Image Retrieval |
Antani SK, Deserno TM, Long LR, Guld MO, Neve L, Thoma GR
|
| Proc. Workshop on Medical Imaging Research (Bildverarbeitung fur die Medizin). March 2007; 166-71. |
| (Abstract) (PDF)
|
|
| Inter-observer Agreement in the Evaluation of Digitized Cervical Images |
Jeronimo J, Massad S, Castle PE, Schiffman M, NIH/ASCCP Research Group
|
| American Journal of Obstetrics and Gynecology. Vol. 197, Issue 1, July 2007 |
| (Abstract) |
|
| Interpreting Comparative Constructons in Biomedical Text |
Fiszman M, Demner-Fushman D, Lang FM, Goetz P, Rindflesch TC
|
| Proc. 2007 Workshop on Biomedical Natural Language Processing (BioNL'07), June 2007, pp. 137-144, Prague, Czech Republic. |
| (Abstract) (PDF)
|
|
| Investigating CBIR Techniques for Cervicographic Images |
Xue Z, Antani S, Long LR, Jeronimo J, Thoma GR
|
| To appear in Proceedings of the 2007 Annual Symposium of the American Medical Information Association (AMIA 2007), Chicago, November 2007, pp. 826-830 |
| (Abstract) (PDF)
|
|
| Investigating Subsumption in SNOMED CT: An Exploration into Large Description Logic-based Biomedical Terminologies |
Bodenreider O, Smith B, Kumar A, Burgun A
|
| Artificial Intelligence in Medicine 2007;39(3):183-195. |
| (Abstract) (PDF)
(PMID: 17241777
) |
|
| Issues in Integrating Epidemiology and Research Information in Oncology: Experience with ICD-O3 and the NCI Thesaurus |
|
|
| Proc AMIA Annu Symp; 2007:pp 85-89. |
| (Abstract) (PDF)
(PMID: 18693803
) |
|
| Issues in the Registration of Clinical Trials |
Zarin DA, Ide NC, Tse T, Harlan WR, West JC, Lindberg DAB
|
| JAMA 2007:297(19):2112-2120. |
| (Abstract) (PDF)
|
|
| Keeping the Promises Associated with Your Digital Assets: Is it Possible? |
|
|
| In: Archiving 2007 Final Program and Proceedings, pp.146-149, 2007. |
| (Abstract) (PDF)
|
|
| Knowledge-Based Methods to Help Clinicians Find Answers in MEDLINE |
Sneiderman CA, Demner-Fushman D, Fiszman M, Ide NC, Rindflesch TC
|
| 2007 Nov-Dec;14(6):772-80. Epub 2007 Aug 21 |
| (Abstract) (PDF)
|
|
| Lessons Learned from Cross-Validating Alignments Between Large Anatomical Ontologies |
|
|
| MEDINFO 2007:822-826. |
| (Abstract) (PDF)
|
|
| Localizing Text and Symbols in Images from Biomedical Journal Articles |
Li J, Demner-Fushman D, Thoma GR
|
| Poster at 20th NIH Research Festival (BIOINFO-6), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| MedlinePlus en Espaniol and Spanish-Speakers |
|
|
| AMIA Annu Symp Proc; 2007;1028 |
| (Abstract) (PDF)
|
|
| MMSPix - A Multimedia Messaging Service (MMS) Medical Images Weblog |
Fontelo P, Liu F, Muin M, Ducut E, Ackerman A, Paalan-Vasquez F
|
| AMIA Annu Symp Proc; 2007;956 |
| (Abstract) (PDF)
|
|
| Multiple Approaches to Fine-Grained Indexing of the Biomedical Literature |
Neveol A, Shooshan SE, Humphrey SM, Rindflesch TC, Aronson AR
|
| Pacific Symposium on Biocomputing 2007 12:293-303 |
| (Abstract) (PDF)
|
|
| New Frontiers in Biomedical Text Mining |
Zweigenbaum P, Demner-Fushman D, Yu H, Cohen KB
|
| Pacific Symposium on Biocomputing 12:205-208(2007) |
| (Abstract) (PDF)
|
|
| Next Generation Networking: Distributed Multimedia Information for Healthcare |
|
|
| Multimed. Tools Appl. 2007, 33:5-11. |
| (Abstract) (PDF)
|
|
| Oncologic Pathology in Biomedical Terminologies: Challenges for Data Integration |
|
|
| Proc. of the APIII conference on "Anatomic Pathology Informatics and Imaging Support for Translational Medicine", Pittsburgh, Pennsylvania, September 9-12, 2007 2007:Abstract 342. |
| (Abstract) (PDF)
|
|
| Online Medical Journal Article Layout Analysis |
|
|
| Proc. SPIE-IS&T Electronic Imaging 2007, SPIE Vol. 6500: 65000V (1-12). |
| (Abstract) (PDF)
|
|
| PDF File Migration to PDF/A: Technical Considerations |
Walker FL, Gallagher ME, Thoma GR
|
| Proc. IS&T Archiving 2007. Arlington, Virginia, May 2007; 6-11. |
| (Abstract) (PDF)
|
|
| Performance, Instruction, and Technology in Health Care Education |
|
|
| In R. Reiser and J. Dempsey (Eds.) Trends and Issues in Instructional Design and Technology, (2nd Ed.) Merrill Prentice Hall: Upper Saddle River, NJ, 2007. |
| (Abstract) (PDF)
|
|
| PICO Linguist and BabelMeSH: Development and Partial Evaluation of Evidence-based Multilanguage Search Tools for MEDLINE/PubMed |
Fontelo P, Liu F, Leon S, Anne A, Ackerman M
|
| MEDINFO 2007, K. Kuhn et al. (Eds.) |
| (Abstract) (PDF)
|
|
| Potential Applications of RFID Technology in Medicine |
Fontelo P, Liu F, Ackerman M
|
| Telemedicine and e-Health. Apr 2007, Vol. 13, No. 2: 176-177 |
| (Abstract) (PDF)
|
|
| Registering a Clinical Trial in ClinicalTrials.gov |
|
|
| Chest 2007;131;909-912; Prepublished online February 15, 2007; DOI10.1378/chest.06-2450 |
| (Abstract) (PDF)
|
|
| RxNav: An Integrated View on Drug Information |
Zeng K, Bodenreider O, Kilbourne J, Nelson SJ
|
| Proc AMIA Annu Symp; 2007:1202 |
| (Abstract) (PDF)
|
|
| RxNav: Towards an Integrated View on Drug Information |
Zeng K, Bodenreider O, Kilbourne J, Nelson S
|
| MEDINFO 2007:386. |
| (Abstract) (PDF)
|
|
| Salvation by Registration |
|
|
| N Engl J Med 356;2 |
| (Abstract) (PDF)
|
|
| Scanning the Emerging Infectious Diseases Horizon - Visualizing ProMED Emails Using EpiSPIDER |
Tolentino H, Kamadjeu R, Fontelo P, Liu F et al.
|
| Advances in Disease Surveillance 2007;2:169 |
| (Abstract) (PDF)
|
|
| Semantic Clustering of Answers to Clinical Questions |
|
|
| To appear in Proceedings of the 2007 Annual Symposium of the American Medical Information Association (AMIA 2007), Chicago, November 2007, pp. 458-462 |
| (Abstract) (PDF)
|
|
| Simultaneous Layout Style and Logical Entity Recognition in a Heterogeneous Collection of Documents |
|
|
| Proceedings of 9th Int. Conf. on Document Analysis and Recognition (ICDAR2007). Curitiba, Brazil; September 2007, pp. 118-22 |
| (Abstract) (PDF)
|
|
| Slide2Go: A Virtual Slide Collection for Pathology Education |
Conran R, Fontelo P, Liu F, Fontelo M, White E
|
| AMIA Annu Symp Proc; 2007;918 |
| (Abstract) (PDF)
|
|
| SPIRS: A Framework for Content-based Image Retrieval from Large Biomedical Databases |
Hsu W, Long LR, Antani SK
|
| Proc. of MEDINFO August 2007. K. Kuhn etal. (Eds.). 188:92(2007) |
| (Abstract) (PDF)
|
|
| Structure and Content Analysis for HTML Medical Articles: A Hidden Markov Model Approach |
|
|
| Proc August 2007 ACM Symposium on Document Engineering. pp. 199-201. |
| (Abstract) (PDF)
|
|
| Technical Development of PubMed Interact: an Improved Interface for MEDLINE/PubMed Searches |
|
|
| BMC Medical Informatics and Decision Making 2006, 6:36. |
| (Abstract) (PDF)
|
|
| Term Identification Methods for Consumer Health Vocabulary Development |
Zeng QT, Tse T, Divita G et al
|
| J Med Internet Res. 2007 Feb 28;9(1):e4 |
| (Abstract) (PDF)
|
|
| The Consumers' Perspective: Text Features and Readability of Consumer Health Text |
|
|
| Mednet 2007: Germany. 12 Oct 2007. |
| (Abstract) |
|
| Using Discourse Analysis to Improve Text Categorization in MEDLINE |
Ruch P, Geissbuhler A, Gobeill J, Lisacek F, Tbahriti I, Veuthey A, Aronson AR
|
| Medinfo 2007:710-715. |
| (Abstract) (PDF)
|
|
| Using Wireless Handheld Computers to Seek Information at the Point of Care: An Evaluation by Clinicians |
Hauser SE, Demner-Fushman D, Jacobs JL, Humphrey SM, Ford G, Thoma GR
|
| J Am Med Inform Assoc 2007;14:807-814. DOI 10.1197/jamia.M2424. |
| (Abstract) (PDF)
|
|
| Utilization of the PICO Framework to Improve Searching PubMed for Clinical Questions |
Schardt C, Adams MB, Owens T, Jeitz S, Fontelo P
|
| BMC Med Inform Decis Mak. 2007 Jun 15;7:16. |
| (Abstract) (PDF)
|
|
| Visual Appearance of the Uterine Cervix: Correlation with Human Papillomavirus Detection and Type |
Jeronimo J, Massad LS, Schiffman M for the NIH-ASCCP Research Group
|
| Am J Obstet Gynecol 2007; 197:47.e1-47.e8. |
| (Abstract) (PDF)
|
|
| Web-based STAPLE for Quality Estimation of Multiple image Segmentations |
Zhu Y, Long LR, Antani S, Xue Z, Thoma GR
|
| Poster at 20th NIH Research Festival (IMAG-12), September 2007, National Institutes of Health |
| (Abstract) (PDF)
|
|
| Why Media Matter: Media Effectiveness from a Performance Perspective |
|
|
| Performance Improvement Quarterly, 20(1), 9-22. |
| (Abstract) (PDF)
|
|
| |
|
| Year 2006 | Back to top |
| A Blended Training Approach Using Videoconferencing for Distance Education |
Locatis C, Gaines C, Liu W, Gill MJ, Carney J, Foster J, McCall V, Woods M
|
| Journal of the Medical Library Association, October 2006, 94(4):464-8 |
| (Abstract) (PDF)
|
|
| Anatomy in the Digital Age |
|
|
| In: Rifkin, B.A., M.J. Ackerman, J. Folkenberg. Human Anatomy (From the Renaissance to the Digital Age), Abrams, New York, NY, 318-329, 2006. |
| (Abstract) (PDF)
|
|
| Answer Extraction, Semantic Clustering, and Extractive Summarization for Clinical Question Answering |
|
|
| Proceedings of the 21th International Conference on Computational Linguistics and 44th Annual Meeting of the Association for Computational Linguistics (COLING/ACL 2006), July 2006, Sydney, Australia |
| (Abstract) (PDF)
|
|
| A Pragmatic Approach to Summary Extraction in Clinical Trials |
|
|
| In Proceedings of the BioNLP Workshop on Linking Natural Language Processing and Biology at HLT-NAACL 06, pages 124-125, New York City, June 2006. |
| (Abstract) (PDF)
|
|
| Argumentative Feedback: A Linguistically-motivated Term Expansion for Information Retrieval |
Ruch P, Tbahriti I, Bobeill J, Aronson AR
|
| Proc. COLING/ACL 2006, 675-82 |
| (Abstract) (PDF)
|
|
| Argument-predicate Distance as a Filter for Enhancing Precision in Extracting Predications on the Genetic Etiology of Disease |
Masseroli M, Kilicoglu H, Lang F-M, Loane RF, Rindflesch TC
|
| BMC Bioinformatics 2006; 7:291 |
| (Abstract) (PDF)
|
|
| askMEDLINE: a Report on a Year-long Experience |
Fontelo P, Liu F, Ackerman MJ, Schardt CM, Keitz SA
|
| AMIA Annu Symp Proc. 2006;923. |
| (Abstract) (PDF)
|
|
| Assessing Consumer Health Vocabulary Familiarity: An Exploratory Study |
Keselman A, Tse T, Crowell J, Browne A, Ngo L, Zeng Q
|
| Mednet 2006 |
| (Abstract) (PDF)
|
|
| Automatically Identifying Health Outcome Information in MEDLINE Records |
Demner-Fushman D, Few B, Hauser SE, Thoma GR
|
| J Am Med Inform Assoc. 2006 Jan-Feb;13(1):52-60 |
| (Abstract) (PDF)
|
|
| Automatic Extraction of Bibliographic Information from Biomedical Online Journal Articles Using a String Matching Algorithm |
|
|
| Proc. 19th IEEE International Symposium on Computer-Based Medical Systems, June 2006, Salt Lake City, Utah; 905-10 |
| (Abstract) (PDF)
|
|
| Automatic Medical Image Annotation and Retrieval Using SECC |
Yao J, Antani S, Long LR, Thoma GR, Zhang Z
|
| Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 105-10 |
| (Abstract) (PDF)
|
|
| BabelMeSH: Development of a Cross-Language Tool for MEDLINE/PubMed |
Liu F, Fontelo P, Ackerman MJ
|
| Proc. AMIA 2006, American Medical Informatics Association, Bethesda, MD, pg. 1012, 2006 |
| (Abstract) (PDF)
|
|
| Besides Precision and Recall: Exploring Alternative Approaches to Evaluating an Automatic Indexing Tool for MEDLINE |
Neveol A, Zeng K, Bodenreider O
|
| Proc AMIA Symp 2006:589-593 |
| (Abstract) (PDF)
|
|
| Bio-ontologies: Current Trends and Future Directions |
|
|
| Briefings in Bioinformatics 2006;7(3):256-274 |
| (Abstract) (PDF)
|
|
| Challenges and Strategies of the Genetics Home Reference |
Mitchell JA, Fomous C, Fun J
|
| Journal of Web Semantics: Science, Services and Agents on the World Wide Web 2006;4(3):181-195. |
| (Abstract) (PDF)
|
|
| Combining DOM Tree and Geometric Layout Analysis for Online Medical Journal Article Segmentation |
|
|
| Proc. Joint Conference on Digital Libraries (JCDL), June 2006, Chapel Hill, NC; 119-28 |
| (Abstract) (PDF)
|
|
| Comparing the Representation of Anatomy in the FMA and SNOMED CT |
|
|
| Proc AMIA Symp 2006:46-50 |
| (Abstract) (PDF)
|
|
| Comparing Two Approaches to Eliminating Cycles in Terminological Systems |
|
|
| Proceedings of the 15th conference on Pattern Recognition and Artificial Intelligence (RFIA 2006)(electronic proceedings) |
| (Abstract) (PDF)
|
|
| Computer Briefs: Mac versus PC |
|
|
| J. Med. Pract. Manag., 21(6):329-330, 2006 |
| (Abstract) (PDF)
|
|
| Computer Briefs: The Open Triangle |
|
|
| J. Med. Pract. Manag., 22(2):105-106, 2006 |
| (Abstract) (PDF)
|
|
| Concept Negation in Free Text Components of Vaccine Safety Reports |
Tolentino H, Matters M, Walop W, Law B, Tong W, Liu F, Fontelo P, Kohl K, Payne D
|
| AMIA Annu Symp Proc. 2006;1122 |
| (Abstract) (PDF)
|
|
| Content Analysis of Uterine Cervix Images: Initial Steps Towards Content Based Indexing and Retrieval of Cervigrams |
Gordon S, Zimmerman G, Long LR, Antani S, Jeronimo J, Greenspan H
|
| Proc. of SPIE Vol. 6144 61444U-7 |
| (Abstract) (PDF)
|
|
| Cross-Language Search in a Monolingual Health Information System: Flexible Designs and Lexical Processes |
|
|
| In Proceedings of the 9th ISKO Conference, pages 173-182, Vienna, Austria, July 2006. |
| (Abstract) (PDF)
|
|
| Data Integration Through Data Elements: Mapping Data Elements to Terminological Resources |
Mougin F, Burgun A, Bodenreider O
|
| Proceedings of the Second Interntional Symposium on Semantic Mining in Biomedicine (SMBM-2006) 2006:52-59 |
| (Abstract) (PDF)
|
|
| Design of a Digital Library for Early 20th Century Medico-legal Documents |
Thoma GR, Mao S, Misra D, Rees J
|
| Proc. ECDL 2006. Eds: Gonzalo J et al. Berlin: Springer-Verlag; LNCS 4172: 147-57. |
| (Abstract) (PDF)
|
|
| Digital Tools for Collecting Data from Cervigrams for Research and Training in Colposcopy |
Jeronimo J, Long R, Neve L, Bopf M, Antani K, Schiffman M
|
| Journal of Lower Genital Tract Disease, 2006, 10(1):16-25. |
| (Abstract) (PDF)
|
|
| dTagger: A POS Tagger |
Divita G, Browne AC, Loanne R
|
| AMIA 2006 Symposium Proceedings pp 201-203 |
| (Abstract) (PDF)
|
|
| Enhancing Biomedical Ontologies through Alignment of Semantic Relationships: Exploratory Approaches |
Bodenreider O, Peters L, McCray A
|
| Proc AMIA Symp 2006:804-808 |
| (Abstract) (PDF)
|
|
| Experience in Reasoning with the Foundational Model of Anatomy in OWL DL |
Zhang S, Bodenreider O, Golbreich C
|
| In: Altman RB, Dunker AK, Hunter L, Murray TA, Klein TE, editors. Pacific Symposium on Biocomputing 2006: World Scientific; 2006. p. 200-211. |
| (Abstract) (PDF)
|
|
| Exploiting Semantic Relations for Literature-Based Discovery |
Hristovski D, Friedman C, Rindflesch TC
|
| AMIA Annu Symp Proc. 2006; 349-53 |
| (Abstract) (PDF)
|
|
| Exploring and Developing Consumer Health Vocabularies |
|
|
| Journal of the American Medical Informatics Association. 2006 Jan/Feb;(1)24-9. |
| (Abstract) (PDF)
|
|
| Exploring User Navigation during Online Health Information Seeking |
Graham L, Tse T, Keselman A
|
| Proc. AMIA 2006 |
| (Abstract) (PDF)
|
|
| Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort |
Demner-Fushman D, Humphrey SM, Ide NC, Loane RF, Ruch P, Ruiz ME, Smith LH, Tanabe LK, Wilbur WJ, Aronson AR
|
| Proc TREC 2006, 569-76 |
| (Abstract) (PDF)
|
|
| Generative Content Models for Structural Analysis of Medical Abstracts |
Lin J, Karakos D, Demner-Fushman D, Khudanpur S
|
| Proceedings of the 2006 Workshop on Biomedical Natural Language Processing (BioNLP'06), June 2006, New York City, New York |
| (Abstract) (PDF)
|
|
| Genetics Home Reference: Helping Patients Understand the Role of Genetics in Health and Disease |
Fomous C, Mitchell JA, McCray A
|
| Community Genet 2006;9:274-278 |
| (Abstract) (PDF)
|
|
| Global Similarity and Local Divergence in Human and Mouse Gene Co-expression Networks |
Tsaparas P, Marino-Ramirez L, Bodenreider O
|
| BMC Evol Biol 2006;6(1):70 |
| (Abstract) (PDF)
|
|
| Historical Author Affiliations Assist Verification of Automatically Generated MEDLINE Citations |
Sabir TF, Hauser SE, Thoma GR
|
| Proc AMIA 2006 |
| (Abstract) (PDF)
|
|
| Information Rx: Evaluation of a New Informatics Tool for Physicians, Patients, and Libraries |
Siegel ER, Logan RA, Harnsberger RL, Cravedi K, Krause JA, Lyon B, Hajarian K, Uhl J, Ruffin A, Lindberg DA
|
| Information Services and Use. 2006: 16(1): 1-10 |
| (Abstract) (PDF)
|
|
| Interactive Publications: Creation and Usage |
Thoma GR, Ford G, Chung M, Vasudevan K, Antani S
|
| Proc. IS and T/SPIE Electronic Imaging 2006: Digital Publishing. San Jose, CA. Jan 15-19, 2006. |
| (Abstract) (PDF)
|
|
| Interpretation of Data and Identification of Information are Sine Qua Non for Modern Digital Information Services |
|
|
| Proceedings of AMIA Symposium, 2006 |
| (Abstract) (PDF)
|
|
| Law and Order: Assessing and Enforcing Compliance with Ontological Modeling Principles in the Foundational Model of Anatomy |
|
|
| Computers in Biology and Medicine 2006; 36(6-7):674-693 |
| (Abstract) (PDF)
|
|
| Lexical, Terminological and Ontological Resources for Biological Text Mining |
|
|
| Ananiadou S, McNaught J, editors. Text mining for biology and biomedicine: Artech House; 2006. p. 43-66. |
| (Abstract) (PDF)
|
|
| Mapping Data Elements to Terminological Resources for Integrating Biomedical Data Sourcse |
Mougin F, Burgun A, Bodenreider O
|
| BMC Bioinformatics 2006;7(Suppl 3):S6 |
| (Abstract) (PDF)
|
|
| Medical Validation and CBIR of Spine X-ray Images over the Internet |
Antani S, Cheng J, Long J, Long LR, Thoma GR
|
| Proc. ISandT/SPIE Electronic Imaging Science and Technology 2006: Internet Imaging VII. San Jose. CA Jan 15-19, 2006, SPIE Vol. 6061 pp. 60610J (1-9). |
| (Abstract) (PDF)
|
|
| MEDLINE as a Source of Just-in-Time Answers to Clinical Questions |
Demner-Fushman D, Hauser SE, Humphrey SM, Ford GM, Jacobs JL, Thoma GR
|
| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
|
|
| NLM Anatomical Ontology Alignment system: Results of the 2006 ontology alignment contest |
|
|
| Proceedings of the Ontology Alignment Evaluation Initiative 2006 Campaign (OAEI 2006) 2006:145-156 |
| (Abstract) (PDF)
|
|
| Performance, Instruction, and Technology in Health Care |
|
|
| In: Reiser R, Dempsey J, editors. Trends and Issues in Instructional Design and Technology. New Jersey: Merrill/Prentice-Hall:2006. p. 197-208 |
| (Abstract) (PDF)
|
|
| PICO as a Knowledge Representation for Clinical Questions |
Huang X, Lin J, Demner-Fushman D
|
| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
|
|
| Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions |
Azuaje F, Wang H, Zheng H, Bodenreider O, Chesneau A
|
| In: Proceedings of IEEE International Conference on Data Mining (ICDM) 2006, Workshop on Data Mining in Bioinformatics: IEEE Computer Society Press; 2006. p. 114 - 119 |
| (Abstract) (PDF)
|
|
| Pre-Indexing for Fast Partial Shape Matching of Vertebrae Images |
Xu X, Lee DJ, Antani S, Long RL
|
| Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 105-10 |
| (Abstract) (PDF)
|
|
| Preliminary Comparison of Three Search Engines for Point of Care Access to MEDLINE Citations |
Hauser SE, Demner-Fushman D, Ford GM, Jacobs JL, Thoma GR
|
| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
|
|
| Preparing Digitized Cervigrams for Colposcopy Research and Education: Determination of Optimal Resolution and Compression Parameters |
Jeronimo J, Long R, Neve L, Ferris D, Noller K, Spitzer M, Mitra S, Guo J, Nutter B, Castle P, Herrero R, Rodriguez AC, Schiffman M
|
| Journal of Lower Genital Tract Disease, Jan 2006, 10(1):39-44. |
| (Abstract) (PDF)
|
|
| PubMed Interact: an Interactive Search Application for MEDLINE/PubMed |
Muin M, Fontelo P, Ackerman MJ
|
| Proc. AMIA 2006, American Medical Informatics Association, Bethesda, MD, pg. 1039, 2006 |
| (Abstract) (PDF)
|
|
| RxNav: A Web Service for Standard Drug Information |
Zeng K, Bodenreider O, Kilbourne J, Nelson SJ
|
| Proc AMIA Symp 2006:1198 |
| (Abstract) (PDF)
|
|
| Semantic Processing to Enhance Retrieval of Diagnosis Citations from Medline |
Sneiderman, C, Demner-Fushman D, Fiszman M, Rosemblat G, Lang FM, Norwood D, Rindflesch TC
|
| Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006) |
| (Abstract) (PDF)
|
|
| Semantic Representation of Consumer Questions and Physician Answers |
Slaughter LA, Soergel D, Rindflesch TC
|
| Int J Med Inform. 2006;75(7):513-29 |
| (Abstract) (PDF)
|
|
| Situated Question Answering in the Clinical Domain: Selecting the Best Drug Treatment for Diseases |
|
|
| Proceedings of COLING/ACL 2006 Workshop on Task-Focused Summarization and Question Answering, July 2006, Sydney, Australia |
| (Abstract) (PDF)
|
|
| SMS (Short Message Service) for Medline/Pubmed Access at the Point-of Care |
Fontelo P, Liu F, Ackerman MJ
|
| Telemed. and e-Health, 12(2):237, 2006 |
| (Abstract) (PDF)
|
|
| Summarizing Drug Information in Medline Citations |
Fiszman M, Rindflesch TC, Kilicoglu H
|
| AMIA Annu Symp Proc. 2006; 254-8 |
| (Abstract) (PDF)
|
|
| Surviving Change: The First Step Toward Sustaining Your Digital Library |
|
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| J. Trant and D. Bearman (eds.). Museums and the Web 2006: Proceedings, Toronto: Archives and Museum Informatics, published 2006 Mar. |
| (Abstract) (PDF)
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| Technical Development of PubMed Interact: an Improved Interface for MEDLINE/PubMed Searches |
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| BMC Med Inform Decis Mak. 2006 Nov 3;6:36 |
| (Abstract) (PDF)
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| Technology for Medical Education, Research, and Disease Screening by Exploitation of Biomarkers in a Large Collection of Uterine Cervix Images |
Long RL, Antani S, Jeronimo J, Schiffman M, Bopf M, Neve L, Cornwall C, Budihas SC, Thoma GR
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| Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 826-31 |
| (Abstract) (PDF)
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| Text Features and Readability: Expert Evaluation of Consumer Health Text |
Rosemblat G, Logan R, Tse T, Graham L
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| Mednet 2006: 11th World Congress on Internet in Medicine the Society for Internet in Medicine. October 14-16, 2006. Toronto, Canada. |
| (Abstract) (PDF)
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| The Effect of User Factors on Consumer Familiarity with Health Terms: Using Gender as a Proxy for Background Knowledge about Gender-Specific Illnesses |
Keselman A, Massengale L, Ngo L, Browne A, Zeng Q
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| ISBMDA 2006: 472-481 |
| (Abstract) (PDF)
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| The Foundational Model of Anatomy in OWL: Experience and Perspectives |
Golbreich C, Zhang S, Bodenreider O
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| Journal of Web Semantics: Science, Services and Agents on the World Wide Web 2006;4(3):181-195. |
| (Abstract) (PDF)
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| The Role of Knowledge in Conceptual Retrieval: A Study in the Domain of Clinical Medicine |
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| Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR 2006), pages 99-106, August 2006, Seattle, Washington |
| (Abstract) (PDF)
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| The Role of the National Library of Medicine Web Sites in Newborn Screening Education |
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| Ment Retard Dev Disabil Res Rev. 2006;12(4):305-12 |
| (Abstract) (PDF)
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| Txt2MEDLINE: Text-Messaging Access to MEDLINE/PubMed |
Fontelo P, Liu F, Muin M, Tolentino H, Ackerman MJ
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| Proc.AMIA Annu Symp Proc. 2006;:259-63. |
| (Abstract) (PDF)
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| User Study of a Spanish-language ClinicalTrials.gov Prototype System |
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| To appear in Proceedings of the American Medical Informatics Association Annual Conference (AMIA 2006), Washington, DC, November 2006 pp 659-664. |
| (Abstract) (PDF)
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| Using Dependence Relations in MeSH as a Framework for the Analysis of Disease Information in Medline |
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| Proceddings of the Second International Symposium on Semantic Mining in Biomedicine (SMBM-2006) 2006:76-83 |
| (Abstract) (PDF)
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| Using UMLS Metathesaurus Concepts to Describe Medical Images: Dermatology Vocabulary |
Woods JW, Sneiderman CA, Hameed K, Ackerman MJ, Hatton C
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| Comput Biol Med. 2006 Jan;36(1):89-100. |
| (Abstract) (PDF)
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| Using WordNet to Improve the Mapping of Data Elements to UMLS for Data Sources Integration |
Mougin F, Burgun A, Bodenreider O
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| Proc AMIA Symp 2006:574-578. |
| (Abstract) (PDF)
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| Word Sense Disambiguation by Selecting the Best Semantic Type Based on Journal Descriptor Indexing: Preliminary Experiment |
Humphrey SM, Rogers WJ, Kilicoglu H, Demner-Fushman D, Rindflesch TC
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| Journal of the American Society for Information Science and Technology. 2006 Jan 1;57(1):96-113. |
| (Abstract) (PDF)
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| Year 2005 | Back to top |
| Accessing MEDLINE/PubMed with Handheld Devices: Developments and New Search Portals |
Fontelo P, Nahin A, Liu F, Kim G, Ackerman MJ
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| Proc. of the 38th Hawaii International Conference on System Sciences. 2005;:1-5. |
| (Abstract) (PDF)
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| A Consumer Health Informatics (CHI) Toolbox: Challenges and Implications |
Bakker TA, Ryce AN, Logan RA, Tse T, Hutcherson L
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| Proceedings of AMIA Symposium 2005: 21-5. |
| (Abstract) (PDF)
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| A Consumer Health Informatics (CHI) Toolbox: Challenges and Implications |
Bakker TA, Ryce AN, Logan RA, Tse T, Hutcherson LY
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| Proc. AMIA 2005: 21-25 |
| (Abstract) (PDF)
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| Alignment of Multiple Ontologies of Anatomy: Deriving Indirect Mappings from Direct Mappings to a Reference |
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| Proceedings of AMIA Annual Symposium 2005:864-868. |
| (Abstract) (PDF)
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| An Ontology-Driven Clustering Method for Supporting Gene Expression Analysis |
Wang H, Azuaje F, Bodenreider O
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| Proceedings of the 18th IEEE International Symposium on Computer-Based Medical Systems 2005:389-394. |
| (Abstract) (PDF)
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| An ontology of chemical entities helps identify dependence relations among Gene Ontology terms |
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| Proceedings of the First International Symposium on Semantic Mining in Biomedicine (SMBM-2005) 2005. |
| (Abstract) (PDF)
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| Applying Vertebral Boundary Semantics to CBIR of Digitized Spine X-Ray Images |
Antani SK, Long RL, Thoma GR
|
| Proceedings SPIE Electronic Imaging Science and Technology, Conference on Storage and Retrieval Methods and Applications for Multimedia. 2005;5682:98-107. |
| (Abstract) (PDF)
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| Approaches to Eliminating Cycles in the UMLS Metathesaurus: Naive vs. Formal |
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| Proceedings of AMIA Annual Symposium 2005:550-554. |
| (Abstract) (PDF)
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| A Probabilistic Approach to Segmentation and Classification of Neoplasia in Uterine Cervix Images Using Color and Geometric Features |
Tulpule B, Hernes DL, Srinivasan Y, Mitra S, Sriraja Y, Nutter BS, Phillips B, Long RL, Ferris DG
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| SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:995-1003. |
| (Abstract) (PDF)
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| askMEDLINE: A Free-Text, Natural Language Query Tool for MEDLINE/PubMed |
Fontelo P, Liu F, Ackerman MJ
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| BMC Medical Informatics and Decision Making. 2005. 5;5:1-14. |
| (Abstract) (PDF)
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| Assessment of the National Library of Medicine's Health Disparities Plan: A Focus on Native American Outreach |
Siegel ER, Wood FB, Dutcher GA, Ruffin A, Logan RA, Scott J
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| Journal of the Medical Library Association. 93:4 (October 2005): 10-20 |
| (Abstract) (PDF)
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| A Text Corpora-Based Estimation of the Familiarity of Health Terminology |
Zeng Q, Kin E, Crowell J, Tse T
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| VI International Symposium on Biological and Medical Data Analysis (ISBMDA), Aveiro, Portugal, 10-11 November 2005:184-92. |
| (Abstract) (PDF)
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| Automated Cleanup Processing for Extracting Bibliographic Data from Biomedical Online Journals |
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| In: Callaos N, Lesso W, editors. SCI 2005. Proc. 9th World Multiconference on Systemics, Cybernetics and Informatics; 2005 Jul 10-13; Vol. 4; Orlando (FL): International Institute of Informatics and Systemics; c2005. 401-5. |
| (Abstract) (PDF)
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| Automated Labeling Of Biomedical Online Journal Articles |
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| In: Callaos N, Lesso W, editors. SCI 2005. Proc. 9th World Multiconference on Systemics, Cybernetics and Informatics; 2005 Jul 10-13; Vol. 4; Orlando (FL): International Institute of Informatics and Systemics; c2005. 406-11 |
| (Abstract) (PDF)
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| Automated Metadata Extraction to Preserve the Digital Contents of Biomedical Collections |
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| Proc. 5th IASTED International Conference on Visualization, Imaging and Image Processing (VIIP 2005). September 2005. Benidorm, Spain; 214-19 |
| (Abstract) (PDF)
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| Automatically Creating Biomedical Bibliographic Records from Printed Volumes of Old Indexe |
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| In: Callaos N, Lesso W, editors. SCI 2005. Proc. 9th World Multiconference on Systemics, Cybernetics and Informatics; 2005 Jul 10-13; Vol. 3, Computer Science and Engineering. Orlando (FL): International Institute of Informatics and Systemics; c2005. 267-74 |
| (Abstract) (PDF)
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| A Web Application to Support Consumer Health Vocabulary Development |
Crowell J, Zeng QT, Tse T
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| Proceedings of AMIA Symposium Poster 2005: 932. |
| (Abstract) (PDF)
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| Biomedical Ontologies |
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| In: Chen H, Fuller S, Jersh WR, Friedman C, editors. Medical Informatics: Advances in Knowledge Management and Data Mining in Biomedicine: Springer-Verlag; 2005. p. 211-236. |
| (Abstract) (PDF)
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| Classifying diseases with respect to anatomy: a study in SNOMED CT |
Bergun A, Bodenreider O, Mougin F
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| Proceedings of AMIA Annual Symposium 2005:91-95. |
| (Abstract) (PDF)
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| Computer Briefs: Practicing Safe Computing |
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| J. Med. Pract. Manag., 20(6):303-304, 2005 |
| (Abstract) (PDF)
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| Computer Briefs: Spyware and Adware |
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| J. Med. Pract. Manag., 20(4):183-184, 2005 |
| (Abstract) (PDF)
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| Computer Network for Health Care Organizations in Low-Resource Environments |
Ekong D, Fontelo P, Ackerman MJ
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| Telemed and e-Health, 11(2):245, 2005 |
| (Abstract) (PDF)
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| Creating a Vaccine Adverse Event Ontology for Public Health |
Herman TD, Liu F, Sagaram D, Raoul K, Fontelo P, Kohl K, Payne D
|
| AMIA Annu Symp Proc. 2005;978 |
| (Abstract) (PDF)
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| Design and Evaluation of a Curve Matching-based Spine X-ray Image Retrieval System |
Lee D, Antani SK, Xu X, Long LR
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| SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:365-373. |
| (Abstract) (PDF)
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| Design Strategies for a Prototype Electronic Preservation System for Biomedical Documents |
Mao S, Misra D, Seamans J, Thoma GR
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| IS&T Archiving 2005 Conference, April 2005; 48-53. |
| (Abstract) (PDF)
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| Determining Prominent Subdomains in Medicine |
Bernhardt PJ, Humphrey SM, Rindflesch TC
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| Proceedings of the AMIA Annual Symposium. 2005;:46-50. |
| (Abstract) (PDF)
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| Developing a Comprehensive System for Content-based Image Retrieval of Image and Text from a National Survey |
Antani SK, Natarajan M, Long JL, Long RL, Thoma GR
|
| SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:152-161. |
| (Abstract) (PDF)
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| Effects of Information and Machine Learning Algorithms on Word Sense Disambiguation with Small Datasets |
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| International Journal of Medical Informatics. 2005 Aug;74(7-8):573-85. |
| (Abstract) (PDF)
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| Enhancing Access to Patient Education Information: A Pilot Usability Study |
Beaudoin DE, Rocha RA, Tse T
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| Proceedings of AMIA Symposium Poster 2005:892. |
| (Abstract) (PDF)
|
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| Evaluation of French and English MeSH Indexing Systems with a Parallel Corpus |
Neveol A, Mork JG, Aronson AR, Darmoni SJ
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| AMIA Annu Symp Proc. 2005;:565-9 |
| (Abstract) (PDF)
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| Fusion of Knowledge-intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents |
Aronson AR, Demner-Fushman D, Humphrey SM, Lin J, Liu H, Ruch P, Ruiz ME, Smith LH, Tanabe LK, Wilbur WJ
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| Proc TREC 2005, 36-45 |
| (Abstract) (PDF)
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| GenesTrace: Phenomic Knowledge Discovery Via Structured Terminologies |
Cantor MN, Sarkar INK, Bodenreider O, Lussier YA
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| Pacific Symposium on Biocomputing 2005: World Scientific. 2005;:103-114. |
| (Abstract) (PDF)
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| Identifying Consumer-Friendly Display (CFD) Names for Health Concepts |
Zeng QT, Tse T, Crowell J, Divita G, Roth L, Browne AC
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| Proceedings of AMIA Symposium 2005: 859-63. |
| (Abstract) (PDF)
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| Image Informatics at a National Research Center |
Long R, Antani SK, Thoma GR
|
| Computerized Medical Imaging and Graphics, 2005. 29:171-193. |
| (Abstract) (PDF)
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| Image Informatics At A National Research Center |
Long RL, Antani SK, Thoma GR
|
| Computerized Medical Imaging and Graphics. 2005; 29 (2-3): 171-193. |
| (Abstract) (PDF)
|
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| Implementing RxNav, a RxNorm Browser |
Zeng K, Bodenreider O, Nelson SJ
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| Proceedings of Medical Informatics Europe 2005 (CD-ROM) 2005:1268. |
| (Abstract) (PDF)
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| Issues in the Classification of Disease Instances with Ontologies |
Bergun A, Bodenreider O, Jacquelinet C
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| Stud Health Technol Inform 2005;116:695-700. |
| (Abstract) (PDF)
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| Knowledge Integration for Bio-Threat Response |
Backer A, Bodenreider O, Karp P, Kelly H, Loranger S, Musen M, Sriram R, Wroe C
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| Los Alamos White Paper |
| (Abstract) (PDF)
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| Linking the Gene Ontology to other biological ontologies |
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| Proceedings of the ISMB'2005 SIG meeting on Bio-ontologies 2005:17-18. |
| (Abstract) (PDF)
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| Medical Facts to Support Inferencing in Natural Language Processing |
Rindflesch TC, Pakhomov SV, Fiszman M, Kilicoglu H, Sanchex VR
|
| Proceedings of the AMIA Annual Symposium. 2005;:634-38. |
| (Abstract) (PDF)
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| MedPost: A Part of Speech Tagger for BioMedical Text |
Smith L, Rindflesch TC, Wilbure WJ
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| Bioinformatics. 2004 Sep 22;20(14):2320-1. |
| (Abstract) (PDF)
|
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| MedTag: A Collection of Biomedical Annotations |
Smith L, Rindflesch TC, Wilbure WJ
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| Bioinformatics. 2004 Sep 22;20(14):2320-1. |
| (Abstract) (PDF)
|
|
| MeSH Speller + askMEDLINE: Auto-completes MeSH Terms Then Searches MEDLINE/PubMed via Free-text, Natural Language Queries |
Fontelo P, Liu F, Ackerman MJ
|
| Proc. AMIA 2005, American Medical Informatics Association, Bethesda, MD, pg. 957, 2005. |
| (Abstract) (PDF)
|
|
| Migrating the FMA from Protege to OWL |
Golbreich C, Zhang S, Bodenreider O
|
| Proceedings of the Eighth International Protege Conference 2005:108-111. |
| (Abstract) (PDF)
|
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| Naturally Clean and Wholesome; Women, Sex Education and the United States Public Health Service, 1918-1928. |
|
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| 2005:;1-34. |
| (Abstract) (PDF)
|
|
| Non-Lexical Approaches to Identifying Associative Relations in the Gene Ontology |
Bodenreider O, Aubry M, Burgun A
|
| Pacific Symposium on Biocomputing 2005: World Scientific. 2005;:91-102. |
| (Abstract) (PDF)
|
|
| Of Mice and Men: Aligning Mouse and Human Anatomies |
Bodenreider O, Hayamizu TF, Ringwald M, De Coronado S, Zhang S
|
| Proceedings of AMIA Annual Symposium 2005:61-65. |
| (Abstract) (PDF)
|
|
| Ontology-driven Similarity Approaches to Supporting Gene Functional Assessment |
Azuaje F, Wang H, Bodenreider O
|
| Proceedings of the ISMB'2005 SIG meeting on Bio-ontologies 2005:9-10. |
| (Abstract) (PDF)
|
|
| Open Source Software for Medical Image Processing and Visualization |
|
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| Communications of the ACM, 48(2):55-59, Feb. 2005 |
| (Abstract) (PDF)
|
|
| Preliminary comparison of the SEER and PubMed search engines for answering clinical questions using PubMed on Tap, a PDA-based program for accessing biomedical literature |
|
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| Proceedings of AMIA Annual Symposium, October 22-26, 2005, Washington, D.C. |
| (Abstract) (PDF)
|
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| Promoting the Usability of Online AMIA Symposium Proceedings |
m GR, Zambrowicz C, Zhang D, Fontelo P, Abbott PA
|
| AMIA Annu Symp Proc. 2005;1008 |
| (Abstract) (PDF)
|
|
| Public Access to Anatomic Images |
|
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| Chapter in: Medical Informatics: Knowledge Management and Data Mining in Biomedicine |
| (Abstract) (PDF)
|
|
| PubMed informer: Monitoring MEDLINE/PubMed Through E-mail Alerts, SMS, PDA Downloads and RSS Feeds |
Muin M, Fontelo P, Ackerman MJ
|
| Proc. AMIA 2005, American Medical Informatics Association, Bethesda, MD, pg. 1057, 2005 |
| (Abstract) (PDF)
|
|
| Relevance Feedback for Spine X-ray Retrieval |
Xu X, Lee DJ, Antani S, Long LR
|
| 18th International Symposium on Computer-Based Medical Systems, 2005. Dublin, Ireland; pp. 197-202 |
| (Abstract) (PDF)
|
|
| RxNav: A Progress Report |
Zeng K, Bodenreider O, Nelson SJ
|
| Proceedings of AMIA Annual Symposium 2005:1168. |
| (Abstract) (PDF)
|
|
| Semantic Characteristics of MEDLINE Citations Useful for Therapeutic Decision-making |
Sneiderman C, Demner-Fushman D, Fiszman M, Rindflesch TC
|
| Proceedings of AMIA Annual Symposium, 2005;:1117. |
| (Abstract) (PDF)
|
|
| Semantic Interpretation for the Biomedical Research Literature |
Rindflesch TC, Fiszman M, Bisharah L
|
| In Hsinchun C, Fuller S, Friedman C, Hersh w (eds.) Medical Informatics: Knowledge Management and Data Mining in Biomedicine. Springer: New York, pp. 399-422, 2005. |
| (Abstract) (PDF)
|
|
| Semantic Representation of Consumer Questions and Physician Answers |
Slaughter LA, Soergel D, Rindflesch TC
|
| International Journal of Medical Informatics. August 23, 2005. |
| (Abstract) (PDF)
|
|
| Semi-Automatic Indexing of Full Text Biomedical Articles |
Gay CW, Kayaalp M, Aronson AR
|
| AMIA Annu Symp Proc. 2005;:271-5 |
| (Abstract) (PDF)
|
|
| SLIM: An Alternative Web Interface for MEDLINE/PubMed Searches - a Preliminary Study |
Muin M, Fontelo P, Hameed K, Liu F, Ackerman MJ
|
| BMC Med Inform Decis Mak. 2005 Dec 1:5:37. |
| (Abstract) (PDF)
|
|
| Supporting Access to Consumer Health Information Across Languages |
Rosemblat G, Tse T, Gemoets D, Gillen JE, Ide NC
|
| Proceedings of the 9th World Congress on Health Information and Libraries (ICML-9), September 20-23, 2005; Salvador, Bahia, Brazil. |
| (Abstract) (PDF)
|
|
| The Foundational Model of Anatomy in OWL: experience and perspectives |
Golbreich C, Zhang S, Bodenreider O
|
| Proceedings of the Workshop on OWL: Experiences and Directions 2005. |
| (Abstract) (PDF)
|
|
| The Importance of the Lexicon in Tagging Biological Text |
Smith LH, Rindflesch TC, Wilbur WJ
|
| Natural Language Engineering 2005. |
| (Abstract) (PDF)
|
|
| The National Library of Medicine's Native American Outreach Portfolio: A Descriptive Overview |
Wood FB, Siegel ER, Dutcher GA, Ruffin A, Logan RA
|
| Journal of the Medical Library Association. 93:4 (October 2005): 21-34 |
| (Abstract) (PDF)
|
|
| The Role of Title, Metadata and Abstract in Identifying Clinically Relevant Journal Articles |
Demner-Fushman D, Hauser SE, Thoma GR
|
| Proceedings of AMIA Annual Symposium, October 22-26, 2005, Washington, D.C. |
| (Abstract) (PDF)
|
|
| Trial Registration at ClinicalTrials.gov between May and October 2005 |
|
|
| New England Journal of Medicine 2005 December 29,353(26):2779-87. |
| (Abstract) (PDF)
|
|
| Unsupervised Style Classification of Document Page Images |
|
|
| Proc. IEEE International Conference on Image Processing, September 2005, Genova, Italy; Vol. II: 510-13 |
| (Abstract) (PDF)
|
|
| Utilizing the UMLS for Semantic Mapping between Terminologies |
|
|
| Proceedings of AMIA Annual Symposium 2005:266-270. |
| (Abstract) (PDF)
|
|
| Virtual Evidence Cart - RP (VEC-RP) |
Liu F, Fontelo P, Muin M, Ackerman MJ
|
| Proc. AMIA 2005, American Medical Informatics Association, Bethesda, MD, pg. 1034, 2005. |
| (Abstract) (PDF)
|
|
| Virtual Microscopy: Potential Applications in Medical Education and Telemedicine in Countries with Developing Economies |
Fontelo P, DiNino E, Johansen K, Khan A, Ackerman MJ
|
| Proc. of the 38th Hawaii International Conference on System Sciences. 2005;:1-5. |
| (Abstract) (PDF)
|
|
| Why Do We Need Probabilistic Approaches to Ontologies and the Associated Data? |
|
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| Proc AMIA Symposium 2005 |
| (Abstract) (PDF)
|
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| |
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| Year 2004 | Back to top |
| Abstraction Summarization for Managing the Biomedical Research Literature |
Fiszman M, Rindflesch TC, Kilicoglu H
|
| Proceedings of the HLT-NAACL Workshop on Computational Lexical Semantics. 2004;:76-83. |
| (Abstract) (PDF)
|
|
| Adapting A Monolingual Consumer Health System for Cross-Language Information Retrieval |
Rosemblat G, Tse T, Gemoets D
|
| Advances in Knowledge Organization, Proceedings of the Eighth International ISKO Conference. 2004 July;9:315-321. |
| (Abstract) (PDF)
|
|
| Adopting New Technology Into Society: Going From an Idea to an Institution |
|
|
| Public Policy and Aging Report, 2004. 14(1):25. |
| (Abstract) (PDF)
|
|
| A Dynamic Feature Generation System for Automated Metadata Extraction in Preservation of Digital Materials |
|
|
| Proc. International Workshop on Document Image Analysis for Libraries (DIAL2004). 2004 Jan;: 225-32. |
| (Abstract) (PDF)
|
|
| Aligning Knowledge Sources in the UMLS: Methods, Quantitative Results, and Applications |
|
|
| Medinfo. 2004 Sept.;2004:327-331. |
| (Abstract) (PDF)
|
|
| An Architecture for Streamlining the Implementation of Biomedical Text/Image Databases on the Web |
Bopf M, Coleman T, Long LR, Antani S, Thoma GR, Jeronimo J, Schiffman M
|
| Proc. 17th IEEE Symposium on Computer-Based Medical Systems. 2004 June.;: 563-69. |
| (Abstract) (PDF)
|
|
| Anterior Osteophyte Discimination in Lumbar Vertebrae Using Size-Invariant Features |
Cherukuri M, Stanley RJ , Long R , Antani S , Thoma G
|
| Computerized Medical Imaging and Graphics. 2004; 28: 99-108. |
| (Abstract) (PDF)
|
|
| Application of a Medical Text Indexer to an Online Dermatology Atlas |
Kim GR , Aronson AR, Mork JG, Cohen BA, Lehmann CU
|
| MedInfo. 2004 Sept.;2004:. |
| (Abstract) (PDF)
|
|
| Assessing Readability of Consumer Health Information: An Exploratory Study |
Gemoets D, Rosemblat G, Tse T, Logan R
|
| Medinfo. 2004 Sept.;2004:869-73. |
| (Abstract) (PDF)
|
|
| A Testbed System for Mobile Point-Of-Care Information Delivery |
Hauser SE, Demner-Fushman D, Ford G, Thoma GR
|
| Proc. 17th IEEE Symposium on Computer-Based Medical Systems. 2004 June;: 147-52. |
| (Abstract) (PDF)
|
|
| A Tool for Collection of Region Based Data from Uterine Cervix Images for Correlation of Visual and Clinical Variables Related to Cervical Neoplasia |
Jeronimo J, Schiffman M, Long LR, Neve L, Antani S
|
| Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;:558-62. |
| (Abstract) (PDF)
|
|
| A Usability Study of the PubMed on Tap User Interface for PDAs |
Alexander GL, Hauser S, Steely K, Ford G, Demner-Fushman D
|
| Medinfo. 2004 Sept.;2004: 1411-1415. |
| (Abstract) (PDF)
|
|
| Automated Article Links Identification for Web-Based Online Medical Journals |
|
|
| Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;5:462-6. |
| (Abstract) (PDF)
|
|
| Automated Labeling for Biomedical Journals Published in Foreign Languages |
|
|
| Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;:444-9. |
| (Abstract) (PDF)
|
|
| A Web-Based Paradigm for File Migration |
|
|
| Proc. of IS and T's Archiving Conference. 2004 April. |
| (Abstract) (PDF)
|
|
| Bayesian Learning of 2D Document Layout Models for Automated Preservation Metadata Extraction |
|
|
| Proc. of the Fourth IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP). 2004 Sept.;:329-34. |
| (Abstract) (PDF)
|
|
| Cellular Radio Telecommunication for Health Care: Benefits and Risks |
Sneiderman, CA, Ackerman, MJ
|
| J Am Med Inform Assoc. 2004;11:479-481. DOI 10.1197/jamia.M1532. |
| (Abstract) (PDF)
|
|
| Challenges for Integrating Korean Medical Vocabulary into the UMLS |
Choi J, Han SB, Kim S, Hole WT, Srinivasan S
|
| MedInfo. 2004 Sept.;2004: 1554. |
| (Abstract) (PDF)
|
|
| Comparing Associative Relationships Among Equivalent Concepts Across Ontologies |
|
|
| MedInfo. 2004 Sept.;2004: 459-463. |
| (Abstract) (PDF)
|
|
| Computer Briefs: Internet Telephone Service |
|
|
| J. Med. Pract. Manag.,2004. 20(2):88-89. |
| (Abstract) (PDF)
|
|
| Computer Briefs: Wireless Networking - 802.11? |
|
|
| J. Med. Pract. Manag., 2004. 19(4):198-199. |
| (Abstract) (PDF)
|
|
| Computer Briefs: Wireless Networking - Security |
|
|
| J. Med. Pract. Manag., 2004. 19(6):299-300. |
| (Abstract) (PDF)
|
|
| Content-Based Image Retrieval for Large Biomedical Image Archives |
Antani S, Long R, Thoma GR
|
| Medinfo. 2004 Sept.;2004: 829-833. |
| (Abstract) (PDF)
|
|
| Curve Matching for Spine X-ray Image Retrieval Using Dynamic Programming |
Xu X, Lee DJ, Antani S, Long LR
|
| Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:172-6. |
| (Abstract) (PDF)
|
|
| Design, Implementation and Management of a Web-based Data Entry System for ClinicalTrials.gov |
Gillen JE, Tse T, Ide NC, McCray AT
|
| Medinfo. 2004 Sept.;2004:1466-70. |
| (Abstract) (PDF)
|
|
| Design of Genetics Home Reference: A New NLM Consumer Health Resource |
Mitchell JA, Fun J, McCray AT
|
| Journal of the American Medical Informatics Association. 2004 Nov.;11(6):439-447. |
| (Abstract) (PDF)
|
|
| Development of a Test Collection of Manually Extracted Semantic Relationships in Health Consumer Texts |
Slaughter LA, Rindflesch TC
|
| MedInfo. 2004 Sept.;2004: 1865. |
| (Abstract) (PDF)
|
|
| Development of Evidence-Based Medicine Resources: Bridging Clinical Research to Medical Practice |
Fontelo P , Ackerman M , Kim G
|
| Proc. of the 37th Annual Hawaii International Conference on System Sciences (HICSS'04) - Track 6. ISBN:0-7695-2056-1 IEEE. 2004;6: 2004. |
| (Abstract) (PDF)
|
|
| Evaluating Consumer Informatics: Learning from Health Campaign Research |
|
|
| Medinfo. 2004;2004:1147-51. |
| (Abstract) (PDF)
|
|
| Evaluating Partial Shape Queries for Pathology-Based Retrieval of Verterbra |
Shou J, Antani S, Long LR, Thoma GR
|
| Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:155-60. |
| (Abstract) (PDF)
|
|
| Evidence-Based Medicine Needs Easy-To-Use Handheld Tools for Universal Utilization |
|
|
| Medscape General Medicine. www.medscape.com. 2004 Sept. 6(3). |
| (Abstract) (PDF)
|
|
| Failure Analysis of MetaMap Transfer (MMTx) |
|
|
| Medinfo. 2004 Sept.;2004:763-7. |
| (Abstract) (PDF)
|
|
| From Functional Similarity Among Gene Products to Dependence Relations Among Gene Ontology Terms (Abstract) |
Bodenreider O, Aubry M, Burgun A
|
| Proceedings of the second conference on Standards and Ontologies for Functional Genomics (SOFG 2) 2004:53. |
| (Abstract) (PDF)
|
|
| Gene Expression Correlation and Gene Ontology-Based Similarity: An Assessment of Quantitative Relationships |
Wang H, Azuaje F, Bodenreider O, Dopazo J
|
| Proceedings of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB'2004) 2004:25-31. |
| (Abstract) (PDF)
|
|
| Gene Ontology-Driven Similarity for Gene Expression Correlation Analysis |
Azuaje FJ, Bodenreider O, Wang H, Dopazo J
|
| Proceedings of the second conference on Standards and Ontologies for Functional Genomics (SOFG 2) 2004:47. |
| (Abstract) |
|
| GenesTraceTM: Biological Knowledge Discovery via Structured Terminology |
Sarkar IN, Cantor MN, Bodenreider O, Lussier YA
|
| MedInfo. |
| (Abstract) (PDF)
|
|
| Gene Terms and English Words: An Ambiguous Mix |
Sehgal AK, Srinivasan P, Bodenreider O
|
| Proceedings of the SIGIR 2004 Workshop on Search and Discovery in Bioinformatics 2004. |
| (Abstract) (PDF)
|
|
| Helping Healthcare Consumers Understand: An "Interpretive Layer" for Finding and Making Sense of Medical Information |
Soergel D, Tse T, Slaughter L
|
| Medinfo. 2004 Sept.;2004:931-5. |
| (Abstract) (PDF)
|
|
| How Two Korean Newspapers Covered a Public Health Crisis |
Logan RA, Park J, Shin JH
|
| Science Communication. 25:4:365-389 (June 2004) |
| (Abstract) (PDF)
|
|
| ICPC Multilingual Collaboratory: A Web-and Unicode-Based System for Distributed Editing/Translating/Viewing of the Multilingual International Classification of Primary Care |
Rodgers RBC, Sherwin Z, Lamberts H, Okkes IM
|
| MedInfo. 2004 Sept.;2004: 425-429. |
| (Abstract) (PDF)
|
|
| Identifying Anatomical Concepts in Biomedical Text for Automatic Selection of Images |
Bernhardt PJ, Rindflesch TC, Kilicoglu H, Tringali M
|
| Medinfo. 2004 Sept.;2004: 1521. |
| (Abstract) (PDF)
|
|
| Identifying Respiratory Findings in Emergency Department Reports for Biosurveillance using MetaMap |
Chapman WW, Fiszman M, Dowling JN, Chapman BE, Rindflesch TC
|
| Medinfo. 2004 Sept.;2004: 487-491. |
| (Abstract) (PDF)
|
|
| Image Analysis Techniques for Characterizing Disc Space Narrowing in Cervical Vertebrae |
Chamarthy P , Stanley RJ , Cizek G , Long R , Antani S, Thoma G
|
| Computerized Medical Imaging and Graphics. 2004; 28: 39-50. |
| (Abstract) (PDF)
|
|
| Image Analysis Techniques for the Automated Evaluation of Subaxial Subluxation in Cervical Spine X-Ray Images |
Stanley RJ, Seetharaman S, Long LR, Antani S, Thoma GR, Downey E
|
| Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 204-9. |
| (Abstract) (PDF)
|
|
| Incorporating Ontology-Driven Similarity Knowledge Into Functional Genomics: An Exploratory Study |
|
|
| Proceedings of the 2004 IEEE Fourth Symposium on Bioinformatics and Bioengineering (BIBE-2004) 2004:317-324. |
| (Abstract) (PDF)
|
|
| Investigating Implicit Knowledge in Ontologies with Application to the Anatomical Domain |
|
|
| Altman RB, Dunker AK, Hunter L, Jung TA, Klein TE, editors. Pacific Symposium on Biocomputing 2004: World Scientific. 2004;: 250-261. |
| (Abstract) (PDF)
|
|
| Knowledge-intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations |
Aronson AR, Demner-Fushman D, Humphrey SM, Ide NC, Kim W, Liu H, Loanne RR, Mork JG, Smith LH, Tanabe LK, Wilbur WJ, Xie N
|
| Proc TREC 2004, 503-11 |
| (Abstract) (PDF)
|
|
| Learning The "Washington Way": The United States Public Health Service and the History of Sex Education |
|
|
|
| (Abstract) (PDF)
|
|
| Lessons Learned from Aligning two Representations of Anatomy |
Zhang S, Mork P, Bodenreider O
|
| In: Hahn U, Schulz S, Cornet R, editors. Proceedings of the First International Workshop on Formal Biomedical Knowledge Representation (KR-MED 2004); 2004. p. 102-108. |
| (Abstract) (PDF)
|
|
| Mapping the Gene Ontology Into the Unified Medical Language System |
|
|
| Comparative and Functional Genomics |
| (Abstract) (PDF)
|
|
| Methods for Diagnosing Physiological Conditions of Human Subjects from Multivariate Time Series Biosensor Data |
|
|
| Physiological Data Modeling Contest, the Twenty-First International Conference on Machine Learning (ICML), 2004 July. |
| (Abstract) (PDF)
|
|
| Methods to Visualize Interiors of Human Colons in Volumetric Datasets |
|
|
| MedInfo. 2004 Sept.;2004: 1931. |
| (Abstract) (PDF)
|
|
| Multispectral Digital Cervigram Analyser in the Wavelet Domain for Early Detection of Cervical Cancer |
Yang S , Guo J , King PS, Sriraja Y, Long LR
|
| Proc. SPIE Medical Imaging. 2004 Feb; 5370. |
| (Abstract) |
|
| Organizing Literature Information for Clinical Decision Support |
Demner-Fushman D, Hauser SE, Ford G, Thoma GR
|
| MedInfo. 2004 Sept.;2004: 602-606. |
| (Abstract) (PDF)
|
|
| Partial Shape Matching for CBIR of Spine X-Ray Images |
Antani S, Xu X , Long R , Thoma G
|
| Proc. SPIE Electronic Imaging - Storage and Retrieval Methods and Applications for Multimedia. 2004 Jan; 5307: 1-8. |
| (Abstract) (PDF)
|
|
| Partial Shape Matching of Spine X-Ray Shapes Using Dynamic Programming |
Xu X, Lee DJ, Antani S, Long LR
|
| Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 97-102. |
| (Abstract) (PDF)
|
|
| Prevailing Impressions of Social Actors in Korean News Coverage of a Public Health Crisis |
Logan RA, Shin JH, Park J
|
| Science Communication. 25:4:399-418 (June 2004) |
| (Abstract) (PDF)
|
|
| PubMed on Tap: Discovering Design Principles for Online Information Delivery to Handheld Computers |
Hauser SE, Demner-Fushman D, Ford G, Thoma GR
|
| MedInfo. 2004 Sept.;2004: 1430-1433. |
| (Abstract) (PDF)
|
|
| RxNav: A Semantic Navigation Tool for Clinical Drugs |
|
|
| Medinfo. 2004 Sept.;2004: 1530. |
| (Abstract) (PDF)
|
|
| Shape Based Retrieval in NHANES II |
Tagare HD, Qian X, Fulbright RK, Long RL, Antani SK
|
| Proceedings of the 12th Annual ACM International Conference on Multimedia. 2004. 776-779. |
| (Abstract) (PDF)
|
|
| Shape Indexing in Medical Image Databases Using Pre-Shape Embedding |
Qian X, Tagare HD, Fulbright R, Long R, Antani S
|
| Proc. Distributed Databases and Processing in Medical Image Computing, MICCAI. 2004 Sept.;: 36-44. |
| (Abstract) |
|
| Strategies for Mapping Concepts in Gastrointestinal Endoscopy Reports to the UMLS Metathesaurus |
Tringali M, Rindflesch TC, Kilicoglu H, Fiszman M, Bodenreider O
|
| Medinfo. 2004 Sept.;2004: 1885. |
| (Abstract) (PDF)
|
|
| Strategies for Supporting Consumer Health Information Seeking |
McCray AT, Ide NC, Loane RR, Tse T
|
| Medinfo. 2004 Sept.;2004:1152-6. |
| (Abstract) (PDF)
|
|
| Style-Independent Document Labeling: Design and Performance Evaluation |
|
|
| Proc. SPIE - Document Recognition and Retrieval. 2004 Jan;: 14-22. |
| (Abstract) (PDF)
|
|
| Summarization of an Online Medical Encyclopedia |
Fiszman M, Rindflesch TC, Kilicoglu H
|
| MedInfo. 2004 Sept.;2004: 506-510. |
| (Abstract) (PDF)
|
|
| The NLM Gateway: A Metasearch Engine for Disparate Resources |
Kingsland LC III, Prettyman MF, Shooshan SE
|
| Medinfo. 2004 Sept.;2004: 52-56. |
| (Abstract) (PDF)
|
|
| The NLM Indexing Initiative's Medical Text Indexer |
Aronson AR, Mork JG, Gay CW, Humphrey SM, Rogers WJ
|
| Medinfo. 2004 Sept.;2004: 268-272. |
| (Abstract) (PDF)
|
|
| The Ontology-Epistemology Divide: A Case Study in Medical Terminology |
Bodenreider O, Smith B, Burugn A
|
| Proceedings of the Third International Conference on Formal Ontology in Information Systems (FOIS2004): IOS Press; 2004. p. 185-195. |
| (Abstract) (PDF)
|
|
| The Unified Medical Language System (UMLS): Integrating Biomedical Terminology |
|
|
| Nucleic Acids Res; Database Issue. 2004;32: 267-70. |
| (Abstract) (PDF)
|
|
| Toward Public Volume Database Management: A Case Study of NOVA: The National Online Volumetric Archive |
|
|
| Medical Imaging 2004, PACS and Imaging Informatics. Proc. of SPIE. 2004 Feb;:5371. |
| (Abstract) |
|
| Using Natural Languge Processing, Locus Link, and the Gene Ontology to Compare OMIM to MEDLINE |
Libbus B, Kilicoglu H, Rindflesch TC, Mork JG, Aronson AR
|
| Proceedings of the HLT-NAACL Workshop on Linking the Biological Literature, Ontologies and Databases: Tools for Users. 2004;:69-76. |
| (Abstract) (PDF)
|
|
| Using Symbolic Knowledge in the UMLS to Disambiguate Words in Small Datasets with a Naive Bayes Classifier |
|
|
| Medinfo. 2004 Sept.;2004: 381-385. |
| (Abstract) (PDF)
|
|
| Visible Human Project |
|
|
| McGraw-Hill Yearbook of Science & Technology 2004, McGraw-Hill, New York, New York, 2004. 369-372. |
| (Abstract) (PDF)
|
|
| |
|
| Year 2003 | Back to top |
| Adding NeuroNames to the UMLS Metathesaurus |
|
|
| Neuroinformatics. 2003; 1 (1):61-63. |
| (Abstract) (PDF)
|
|
| Aligning Representations of Anatomy Using Lexical and Structural Methods |
|
|
| Proc. AMIA Symposium. 2003 Nov;:753-757. |
| (Abstract) (PDF)
|
|
| An Evaluation of Hybrid Methods for Matching Biomedical Terminologies: Mapping the Gene Ontology to the UMLS |
Cantor MN, SI N, Hartel F, Bodenreider O, Lussier YA
|
| Stud Health Technol Inform. 2003;:62-67. |
| (Abstract) (PDF)
|
|
| An Upper Level Ontology for the Biomedical Domain |
|
|
| Comp Funct Genom. 2003;4:80-4. |
| (Abstract) (PDF)
|
|
| A Prototype Content-Based Image Retrieval System for Spine X-Rays |
Long LR, Antani SK, Thoma GR
|
| Proc. 16th IEEE Symposium on Computer-Based Medical Systems. 2003 June;: 156-62. |
| (Abstract) (PDF)
|
|
| A SOAP-Based Tool for User Feedback and Analysis |
|
|
| Proc. InfoToday. 2003 ;: 313-322. |
| (Abstract) (PDF)
|
|
| Automated Document Labeling for Web-Based Online Medical Journals |
|
|
| Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics. 2003 July;II: 411-15. |
| (Abstract) (PDF)
|
|
| Automated Labeling Algorithms for Biomedical Document Images |
|
|
| Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics. 2003 July;V: 352-57. |
| (Abstract) (PDF)
|
|
| Automated Labeling of Bibliographic Data Extracted from Biomedical Online Journals |
|
|
| Proc. SPIE Electronic Imaging. 2003 Jan;5010: 47-56. |
| (Abstract) (PDF)
|
|
| Biomedical Information from a National Collection of Spine X-Rays: Film to Content-Based Retrieval |
Long LR, Antani S, Lee DJ, Krainak DM, Thoma GR
|
| Proc. of SPIE Medical Imaging: PACS and Integrated Medical Information Systems. 2003 Feb;5033: 70-84. |
| (Abstract) (PDF)
|
|
| Biomedical Ontologies |
Bodenreider O, Mitchell JA, McCray AT
|
| Pacific Symposium on Biocomputing: World Scientific. 2003;:562-564. |
| (Abstract) (PDF)
|
|
| Categorization of Sentence Types in Medical Abstracts |
|
|
| Proc. AMIA Symposium. 2003 Nov;:440-444 |
| (Abstract) (PDF)
|
|
| Chaulmoogra Oil and the Treatment of Leprosy |
|
|
| Pharm Hist. 2003 ;45(2):47-57. |
| (Abstract) (PDF)
|
|
| Correcting OCR Text by Association with Historic Datasets |
Hauser SE, Schlaifer J, Sabir TF, Demner-Fushman D, Thoma GR
|
| Proc. SPIE Electronic Imaging. 2003 Jan;5010: 84-93. |
| (Abstract) (PDF)
|
|
| Developing and Evaluating Criteria to Help Reviewers of Biomedical Informatics Manuscripts: A Case Report |
Ammenwerth E, Wolff AC, Knaup P, Ulmer H, Skonetzki S, Van Bemmel JH, McCray AT, Haux R, Kulikowski C
|
| J Am Med Inform Assoc. 2003 June. |
| (Abstract) (PDF)
|
|
| Document Structure Analysis Algorithms: A Literature Survey |
Mao S, Rosenfeld A, Kanungo T
|
| Proc. SPIE Electronic Imaging. 2003 Jan;5010:197-207. |
| (Abstract) (PDF)
|
|
| Evaluation of Shape Indexing Methods for Content-Based Retrieval of X-Ray Images |
Antani S, Long LR, Lee DJ, Thoma GR
|
| Proceedings of IS&T/SPIE Electronic Imaging Science and Technology, Storage and Retrieval for Media Databases. 2003 Jan; 5021: 405-16. |
| (Abstract) (PDF)
|
|
| Evaluation of WordNet as a Source of Lay Knowledge for Molecular Biology and Genetic Diseases: A Feasibility Study |
Bodenreider O, Burgun A, Mitchell JA
|
| Stud Health Technol Inform. 2003;95:379-384. |
| (Abstract) (PDF)
|
|
| Exploring Adjectival Modification in Biomedical Discourse Across Two Genres |
Bodenreider O, Pakhomov S
|
| Proc. of the ACL, 2003 Workshop, Natural Language Processing in Biomedicine. 2003;:105-112. |
| (Abstract) (PDF)
|
|
| Exploring Medical Expressions Used by Consumers and the Media: An Emerging View of Consumer Health Vocabularies |
|
|
| AMIA Annual Symposium. 2003. |
| (Abstract) (PDF)
|
|
| Exploring Semantic Groups Through Visual Approaches |
Bodenreider O , McCray AT
|
| Journal of Biomedical Informatics. 2003;36(6):414-432 |
| (Abstract) (PDF)
|
|
| Extraction of Special Effects Caption Text Events from Digital Video |
Crandall D, Antani S, Kasturi R
|
| International Journal of Document Analysis and Recognition. 2003;5(2-3):138-57. |
| (Abstract) (PDF)
|
|
| From Phenotype to Genotype: Issues in Navigating the Available Information Resources |
Mitchell JA , McCray AT , Bodenreider O
|
| Methods of Information in Medicine. 2003;42(5):557-563. |
| (Abstract) (PDF)
|
|
| Gene Indexing: Characterization and Analysis of NLM's GeneRIFs |
Mitchell JA , Aronson AR , Mork JG , Folk LC , Humphrey SM , Ward JM
|
| Proc. AMIA Symposium. 2003 Nov;:460-464. |
| (Abstract) (PDF)
|
|
| Generating Hypotheses by Discovering Implicit Associations in the Literature: A Case Report of a Search for New Potential Therapeutic Uses for Thalidomide |
Weeber M, Vos R, Klein H, De Jong-Van Den Berg LT, Aronson AR, Molema G
|
| J Am Med Inform Assoc. ;10(3):252-9. |
| (Abstract) (PDF)
(PMID: 12626374
) |
|
| Generating Robust Features for Style-Independent Labeling of Bibliographic Fields in Medical Journal Articles |
Mao S, Kim J, Le DX, Thoma GR
|
| Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics.2003 July;III:53-6. |
| (Abstract) (PDF)
|
|
| Graphical Visualization and Navigation of Genetic Disease Information |
Bodenreider O , Mitchell JA
|
| Proc. AMIA Symposium. 2003 Nov;:792. |
| (Abstract) (PDF)
|
|
| Ground Truth Data for Document Image Analysis |
|
|
| Proceedings of 2003 Symposium on Document Image Understanding and Technology. 2003 April 9-11;: 199-205. |
| (Abstract) (PDF)
|
|
| Hierarchical Segmentation of Vertebrae from X-ray Images |
Zamora G, Sari-Sarraf H, Long LR
|
| Proc. of SPIE Medical Imaging: Image Processing. 2003 Feb; 5032. |
| (Abstract) (PDF)
|
|
| Informatics Research, Development, and Training at the Lister Hill National Center for Biomedical Communications |
|
|
| Yearbook of Medical Informatics 03. Stuttgart: Schattauer Verlag. 2003;:193-203. |
| (Abstract) (PDF)
|
|
| Integrating a Hypernymic Proposition Interpreter into a Semantic Processor for Biomedical Texts |
Fiszman M, Rindflesch TC, Kilicoglu H
|
| Proc. AMIA Symposium. 2003 Nov;:239-243. |
| (Abstract) (PDF)
|
|
| Interpreting Hypernymic Propositions in an Online Medical Encyclopedia |
Fiszman M, Rindflesch TC, Kilicoglu H
|
| Proc. AMIA Symposium. 2003 Nov;:840. |
| (Abstract) (PDF)
|
|
| Knowledge Augmentation for Aligning Ontologies: An Evaluation in the Biomedical Domain |
|
|
| Proceedings of the Semantic Integration Workshop at the Second International Semantic Web Conference. 2003: 109-114. |
| (Abstract) (PDF)
|
|
| Language and Vocabulary Tools |
Brown AC , Divita Guy , Aronson AR , McCray AT
|
| Proc. AMIA Symposium. 2003 Nov;:. |
| (Abstract) (PDF)
|
|
| Laptop or Desktop? |
|
|
| J Med Pract Manage. ;18(6):309-10. |
| (Abstract) (PDF)
|
|
| Localizing Contour Points for Indexing an X-Ray Image Retrieval System |
Xu X, Lee DJ, Antani S, Long LR
|
| Los Alamitos, CA: IEEE Computer Society. 2003 June;: 169-74. |
| (Abstract) (PDF)
|
|
| Machine Translation-Supported Cross Language Information Retrieval for a Consumer Health Resource |
Rosemblat G, Gemoets D, Browne AC, Tse T
|
| AMIA Annual Symposium. 2003. |
| (Abstract) (PDF)
|
|
| Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics |
Kayaalp, Mehmet , Aronson, Alan R , Humphrey, Susanne M, Ide, Nicholas C, Tanabe, Lorraine K
|
| Proceedings of the Text Retrieval Conference (TREC-2003). 2003;: 175-84. |
| (Abstract) (PDF)
|
|
| Models of Masculinity: Sex Education, the United States Public Health Service, and the YMCA, 1919-1924 |
|
|
| J Hist Med Allied Sci. 2003 Apr ;58(2):123-52. |
| (Abstract) (PDF)
(PMID: 12776436
) |
|
| OCR Correction Using Historical Relationships from Verified Text in Biomedical Citations |
Hauser SE, Sabir TF, Thoma GR
|
| Proc. of 2003 Symposium on Document Image Understanding Technology. College Park MD: Institute for Advanced Computer Studies, University of Maryland. 2003 April;: 171-7. |
| (Abstract) (PDF)
|
|
| Procedures for Mapping Vocabularies from Non-Professional Discourse and a Case Study from the Medical Domain |
|
|
| ASIST Annual Meeting. 2003. |
| (Abstract) (PDF)
|
|
| Rendering an Archive in Three Dimensions |
Leiman D, Twose C, Lee TY, Fletcher A, Yoo T
|
| Proceedings of SPIE. 2003;5029. |
| (Abstract) (PDF)
|
|
| Search Failures in Consumer Health Information Systems |
|
|
| Proc. AMIA Symposium Proceedings. 2003 November; :431-434. |
| (Abstract) (PDF)
|
|
| Semantic Integration in Biomedicine |
|
|
| Proceedings of the Semantic Integration Workshop at the Second International Semantic Web Conference. 2003;: 156-157. |
| (Abstract) (PDF)
|
|
| Semantic Relations Asserting the Etiology of Genetic Diseases |
Rindflesch TC , Libbus B , Hristovski D , Aronson AR , Kilicoglu H
|
| Proc. AMIA Symposium. 2003 Nov;:554-558. |
| (Abstract) (PDF)
|
|
| Similarity Measurement Using Polygon Curve Representation and Fourier Descriptors for Shape-Based Vertebral Image Retrieval |
Lee DJ, Antani S, Long LR
|
| Proc. of SPIE Medical Imaging: Image Processing. 2003;5032(3): 1283-91. |
| (Abstract) (PDF)
|
|
| Stochastic Language Model for Style-Directed Physical Layout |
|
|
| Analysis of Documents IEEE Transactions on Image Processing. 2003 May;12 (5)5:583-596. |
| (Abstract) (PDF)
|
|
| Strength in Numbers: Exploring Redundancy in Hierarchical Relations Across Biomedical Terminologies |
|
|
| Proc. AMIA Symposium. 2003 Nov;101-105:. |
| (Abstract) (PDF)
|
|
| The Genetics Home Reference: A New NLM Consumer Health Resource |
|
|
| Proc. AMIA Symposium. 2003 Nov;:936. |
| (Abstract) (PDF)
|
|
| The Interaction of Domain Knowledge and Linguistic Structure in Natural Language Processing: Interpreting Hypernymic Propositions in Biomedical Text |
Rindflesch TC , Fiszman M
|
| Journal of Biomedical Informatics. 2003;36(6):462-77. |
| (Abstract) (PDF)
|
|
| The PDA as a Portal to Knowledge Sources in a Wireless Setting |
Fontelo P, Ackerman M, Kim G, Locatis C
|
| Telemed J E Health. 2003 Summer;9(2):141-7. |
| (Abstract) (PDF)
(PMID: 12855037
) |
|
| The UMLS Knowledge Source Server: An Object Model For Delivering UMLS Data |
Bangalore A , Thorn KE , Tilley C , Peters L
|
| Proc. AMIA Symposium. 2003 Nov;:51-55. |
| (Abstract) (PDF)
|
|
| The UMLS Semantic Network and the Semantic Web |
|
|
| Proc. AMIA Symposium. 2003 Nov;:351-355. |
| (Abstract) (PDF)
|
|
| The Visible Human Data Sets (VHD) and Insight Toolkit (ITk) |
|
|
| Proc. AMIA Symposium. Experiments in Open Source Software. 2003 Nov;:773. |
| (Abstract) (PDF)
|
|
| The Wireless Internet |
|
|
| J Med Pract Management. 2003. |
| (Abstract) (PDF)
|
|
| To Bond or Not to Bond: Chemical Versus Physical Theories of Drug Action |
|
|
| Bulletin for the History of Chemistry. 2003;28: 1-8. |
| (Abstract) (PDF)
|
|
| Towards Linking Patients and Clinical Information: Detecting UMLS Concepts in E-mail |
Brennan PF, Rindflesch TC
|
| J Biomed Inform. 2003 Aug-Oct;36(4-5):334-41 |
| (Abstract) (PDF)
|
|
| Towards Semi-Automatic Generation of Biomedical Ontologies |
Kashyap V , Ramakrishan C , Rindflesch TC
|
| Proc. AMIA Symposium. 2003 Nov;:886. |
| (Abstract) (PDF)
|
|
| Vertebra Shape Classification using MLP for Content-Based Image Retrieval |
Antani S, Long LR, Thoma GR, Stanley RJ
|
| International Neural Networks Society and IEEE Neural Networks Society. 2003 July 2003;:160-65. |
| (Abstract) (PDF)
|
|
| Visible Human 2.0 - The Next Generation |
Ratiu P, Hillen B, Glaser J, Jenkins DB
|
| Medicine Meets Virtual Reality 11, J.D. Westwood, et al, ed. IOS Press. 2003;: 275-281. |
| (Abstract) (PDF)
|
|
| Webcasting Videoconferences Over IP: A Synchronous Communication Experiment |
|
|
| J Am Med Inform Assoc. 2003 Mar-Apr;10(2):150-3. |
| (Abstract) (PDF)
(PMID: 12595404
) |
|
| |
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| Year 2002 | Back to top |
| A Biomedical Information System for Combined Content-Based Retrieval of Spine X-ray Images and Associated Text Information |
Antani S, Long LR, Thoma GR
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| 3rd Indian Conference on Computer Vision, Graphics, and Image Processing. 2002 Dec. |
| (Abstract) (PDF)
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| A Conceptual Framework for the Biomedical Domain |
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| The Semantics of Relationships: An Interdisciplinary Perspective. Boston: Kluwer Academic Publishers. 2002;:181-198. |
| (Abstract) (PDF)
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| A Method of Content-Based Retrieval for a Spinal X-Ray Image Database |
Krainak DM, Long LR, Thoma GR
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| Proc. of SPIE Medical Imaging: PACS and Integrated Medical Systems. 2002 Feb;4685. |
| (Abstract) (PDF)
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| Analysis of the Feasibility of Using Active Shape Models for Segmentation of Gray Scale Images |
Zamora G, Sari-Sarraf H, Mitra S, Long R
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| Proc. of SPIE Medical Imaging: Image Processing. 2002 Feb;4684:1370-81. |
| (Abstract) |
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| A Semantic Normal Form for Clinical Drugs in the UMLS: Early Experiences with the VANDF |
Nelson SJ, Brown SH, Erlbaum MS, Olson N, Powell T, Carlsen B, Carter J, Tuttle MS, Hole WT
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| Proc AMIA Symp. 2002 ;():557-61. |
| (Abstract) (PDF)
(PMID: 12463886
) |
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| A SOAP-Enabled System for an Online Library Service |
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| Proc. InfoToday 2002, Medford NJ: Information Today. 2002 May;:320-9. |
| (Abstract) (PDF)
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| Assessing the Consistency of a Biomedical Terminology Through Lexical Knowledge |
Bodenreider O, Burgun A, Rindflesch TC
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| Int J Med Inf. 2002 Dec 4;67(1-3):85-95. |
| (Abstract) (PDF)
(PMID: 12460634
) |
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| Assessing the Consistency of a Biomedical Terminology Through Lexical Knowledge |
Bodenreider O, Burgun A, Rindflesch TC
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| Proc. of the Workshop on Natural Language Processing in Biomedical Applications. 2002;:77-83. |
| (Abstract) (PDF)
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| A Study of Abbreviations in MEDLINE Abstracts |
Liu H, Aronson AR, Friedman C
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| Proc AMIA Symp. 2002 ;():464-8. |
| (Abstract) (PDF)
(PMID: 12463867
) |
|
| A Survey on the Use of Pattern Recognition Methods for Abstraction |
Antani S, Kasturi R, Jain R
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| Indexing and Retrieval of Images and Video Pattern Recognition Journal. 2002;35(4): 945-965. |
| (Abstract) (PDF)
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| Automated Data Entry System: Performance Issues |
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| Proc. SPIE: Document Recognition and Retrieval IX. 2002 Jan;4670: 181-90. |
| (Abstract) (PDF)
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| Chapter 6: Telemedicine Technology |
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| Telemedicine Journal and E-Health. 2002;8(1). Mary Ann Liebert, Inc. |
| (Abstract) (PDF)
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| Characterizing the Definitions of Anatomical Concepts in WordNet and Specialized Sources |
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| Proc. of the First Global WordNet Conference. 2002;:223-230. |
| (Abstract) (PDF)
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| Clinicaltrials.gov: Linking Patients to Medical Research |
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| Cancer Informatics: Essential Technologies for Clinical Trials. New York: Springer Verlag. 2002;:302-307. |
| (Abstract) (PDF)
|
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| Customized Hough Transform for Robust Segmentation of Cervical Vertebrae from X-Ray Images |
Tezmol A, Sari-Sarraf H, Mitra S, Long R, Gururajan A
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| SSIAI. 2002;: 224-228. |
| (Abstract) (PDF)
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| Designing Effective Transfer Functions for Volume Rendering from Photographic Volumes |
Ebert DS, Morris CJ, Rheingans P, Yoo TS
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| IEEE Transactions on Visualization and Computer Graphics. 2002;8(2): 183-197. |
| (Abstract) (PDF)
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| Discovering Protein Similarity Using Natural Language Processing |
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| Proc AMIA Symp. 2002 ;():677-81. |
| (Abstract) (PDF)
(PMID: 12463910
) |
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| DSL and Other Last Mile Solutions |
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| J Med Pract Management. 2002. |
| (Abstract) (PDF)
|
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| Educational Technology and Instructional Development in Health Care |
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| Trends and Issues in Instructional Design and Technology: Merrill Prentice Hall. 2002;: 225-238. |
| (Abstract) (PDF)
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| Engineering and Algorithm Design for an Image Processing API: A Technical Report on ITK - The Insight Toolkit |
Yoo T, Ackerman M, Lorensen W, Schroeder W, Chalana V, Aylward S, Metaxas D, Whitaker R
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| Studies in Health Technology and Informatics, Proc. of Medicine Meets Virtual Reality. J. D. Westwood, et al., eds., Amsterdam: IOS Press. 2002 Feb;85: 586-592. |
| (Abstract) (PDF)
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| Evaluation of the UMLS as a Terminology and Knowledge Resource for Biomedical Informatics |
Bodenreider O, Mitchell JA, McCray AT
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| Proc. of AMIA Annual Symposium. 2002;:61-65. |
| (Abstract) (PDF)
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| Experiences in Visualizing and Navigating Biomedical Ontologies and Knowledge Bases |
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| Proc. of the ISMB'SIG meeting; Bio-ontologies. 2002;:29-32. |
| (Abstract) (PDF)
|
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| Exploring Surface Characteristics with Interactive Gaussian Images (A Case Study) |
Lowekamp B, Rheingans P, Yoo TS
|
| IEEE Visualization. 2002. |
| (Abstract) (PDF)
|
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| Exploring Text Mining from MEDLINE |
Srinivasan P, Rindflesch T
|
| Proc AMIA Symp. 2002 ;():722-6. |
| (Abstract) (PDF)
(PMID: 12463919
) |
|
| Feasibility Studies in IP Videoconferencing, Streaming, and Wireless Communication |
Locatis C, Fontelo M, Ackerman M, Sneiderman C
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| Proc. of the AMIA 2002 Annual Symposium. 2002;: 1090. |
| (Abstract) (PDF)
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| Finding UMLS Metathesaurus Concepts in MEDLINE |
Srinivasan S, Rindflesch TC, Hole WT, Aronson AR, Mork JG
|
| Proc AMIA Symp. 2002 ;():727-31. |
| (Abstract) (PDF)
(PMID: 12463920
) |
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| From Cards to Computers: The National Library of Medicine and the Transmission of Medical Knowledge |
|
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| Medicina nei Secoli. 2002;:14. |
| (Abstract) (PDF)
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| From Germs to Genes: Trends in Drug Therapy, 1852-2002 |
|
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| Pharm Hist. 2002 ;44(1):3-11. |
| (Abstract) (PDF)
|
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| From Phenotype to Genotype: Navigating the Available Information Resources |
Mitchell JA, McCray AT, Bodenreider O
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| Proc. of AMIA Annual Symposium. 2002;:1109. |
| (Abstract) (PDF)
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| Going the Last Mile |
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| J Med Pract Management. ;17(6):295-6. |
| (Abstract) (PDF)
|
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| Greek Alphabet Recognition Technique for Biomedical Documents |
Le DX, Straughan SR, Thoma GR
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| Proc. 6th World Multiconference on Systemics, Cybernetics and Informatics, eds: Callaos N, et al. 2002 July;III: 86-91. |
| (Abstract) (PDF)
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| Identifying Image Structures for Content-Based Retrieval of Digitized Spine X-Rays |
Long LR, Krainak DM, Thoma GR
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| Proc. of SPIE Medical Imaging: Image Processing. 2002 Feb; 4684. |
| (Abstract) (PDF)
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| Integration of a Standard Gastrointestinal Endoscopy Terminology in the UMLS Metathesaurus |
Tringali M, Hole WT, Srinivasan S
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| Proc AMIA Symp. 2002 ;():801-5. |
| (Abstract) (PDF)
(PMID: 12463935
) |
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| Last Mile Broadband: The Experiment |
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| J Med Pract Management. ;18(1):52-3. |
| (Abstract) (PDF)
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| Last Mile Broadband: Trials and Tribulations of Implementing the Plan |
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| J Med Pract Management. ;18(2):107-8. |
| (Abstract) (PDF)
|
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| NLP-Based Information Extraction for Managing the Molecular Biology Literature |
|
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| Proc AMIA Symp. 2002 ;():445-9. |
| (Abstract) (PDF)
(PMID: 12463863
) |
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| Overcoming Impediments to Effective Health and Biomedical Digital Libraries, JCDL |
Hersh WJ, Velterop J, McCray AT, Eynsenbach G, Boguski M
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| JCDL. 2002;: 360. |
| (Abstract) (PDF)
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| Panel on Digital Preservation, JCDL |
Ray J, Dale R, Moore R, Reich V, Underwood W, McCray AT
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| Panel on Digital Preservation, JCDL. 2002;: 365-367. |
| (Abstract) (PDF)
|
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| Representation of Roles in Biomedical Ontologies: A Case Study in Functional Genomics |
Burgun A, Bodenreider O, Le Duff F, Moussouni F, Loreal O
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| Proc AMIA Symp. 2002 ;():86-90. |
| (Abstract) (PDF)
(PMID: 12463792
) |
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| Semantic Processing for Enhanced Access to Biomedical Knowledge |
Rindflesch TC, Aronson AR
|
| Real World Semantic Web Applications, IOS Press. 2002;:157-72. |
| (Abstract) (PDF)
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| Software Architecture of PSET: A Page Segmentation Evaluation Toolkit |
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| International Journal on Document Analysis and Recognition. 2002 Mar;4(3):205-217. |
| (Abstract) (PDF)
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| Text Verification in an Automated System for the Extraction of Bibliographic Data |
Thoma GR, Ford G, Le DX, Li Z
|
| Proc. 5th International Workshop on Document Analysis Systems, Springer-Verlag: Berlin. 2002 Aug;: 423-32. |
| (Abstract) (PDF)
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| The Lexical Properties of the Gene Ontology (GO) |
McCray AT, Browne AC, Bodenreider O
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| Proc. of AMIA Annual Symposium. 2002;:504-508. |
| (Abstract) (PDF)
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| The Visible Human Project Moves from Data to Knowledge |
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| Lekar a Technika. 2002; 33(1):4-12, 2002. |
| (Abstract) |
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| Tracking Meaning Over Time in the UMLS Metathesaurus |
Powell T, Srinivasan S, Nelson SJ, Hole WT, Roth L, Olenichev V
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| Proc AMIA Symp. 2002 ;():622-6. |
| (Abstract) (PDF)
(PMID: 12463898
) |
|
| Trans-Pacific Demonstration of Visible Human |
Nishinaga N, Tatsumi H, Gill M, Akashib A, Nogawa H, Reategui I
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| Space Communications. 2002 March; 17(4):303-311. |
| (Abstract) (PDF)
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| Trends and Events in American Pharmacy, 1852-2002 |
Griffenhagen GB, Brushwood D, Parascandola J, Schondelmeyer S
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| J Am Pharm Assoc (Wash). 2002 Sep-Oct;42(5 Suppl 1):S24-5. |
| (Abstract) (PDF)
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| Unsupervised, Corpus-Based Method for Extending a Biomedical Terminology |
Bodenreider O, Rindflesch TC, Burgun A
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| Proc. of the ACL Workshop; Natural Language Processing in the Biomedical Domain. 2002;:53-60. |
| (Abstract) (PDF)
|
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| Visible Human Project: From Data to Knowledge |
|
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| Yearbook of Medical Informatics. 2002;: 115-117. |
| (Abstract) (PDF)
|
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| Web Crawling Agents for Retrieving Biomedical Information |
Srinivasan P, Mitchell JA, Bodenreider O, Pant G, Menczer F
|
| Proc. of the International Workshop on Bioinformatics and Multi-Agent Systems (BIXMAS). 2002 Jul. |
| (Abstract) (PDF)
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| Year 2001 | Back to top |
| 'Ome Sweet 'Omics - A Genealogical Treasury of Words |
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| Genealogical Treasury of Words. Scientist. 2001;15(7):8. |
| (Abstract) (PDF)
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| Aggregating UMLS Semantic Types for Reducing Conceptual Complexity |
McCray AT, Burgun A, Bodenreider O
|
| Medinfo. 2001 ;10(Pt 1):216-20. |
| (Abstract) (PDF)
(PMID: 11604736
) |
|
| Alice Catherine Evans (1881-1975) |
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| J Public Health Policy. 2001 ;22(1):105-11. |
|
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| A Management System for Network Sharable Locally Installed Software: Merging RPM and the Depot Scheme under Solaris |
|
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| LISA XV: Proceedings of the Fifteenth Systems Administration Conference. 2001 Dec;: 267-272. |
| (Abstract) (PDF)
|
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| Anatomical Modeling from Unstructured Samples Using Variational Implicit Surfaces |
Yoo TS, Morse B, Subramanian KR, Rheingans P, Ackerman MJ
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| Medicine Meets Virtual Reality, IOS Press. 2001;:594-600. |
| (Abstract) (PDF)
|
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| An Object-Oriented Model for Representing Semantic Locality in the UMLS |
|
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| Medinfo. 2001 ;10(Pt 1):161-5. |
| (Abstract) (PDF)
(PMID: 11604725
) |
|
| Approximate String Matching Algorithms for Limited-Vocabulary OCR Output Correction |
|
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| Proc. SPIE, Document Recognition and Retrieval VIII. 2001 Jan;4307:232-40. |
| (Abstract) (PDF)
|
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| A Radius of Curvature Approach to Cervical Spine Vertebra Image Analysis |
|
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| Proc. 38th Annual Rocky Mountain Bioengineering Symposium, 37. 2001 Apr;: 385-90. |
|
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| Aspects of the Taxonomic Relation in the Biomedical Domain |
|
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| FOIS. 2001;: 222-233 |
| (Abstract) (PDF)
|
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| Automated Labeling in Document Images |
|
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| Proc. SPIE, Document Recognition and Retrieval VIII. 2001 Jan;4307:111-22. |
| (Abstract) (PDF)
|
|
| Automated Medical Citation Records Creation for Web-Based Online Journals |
Le DX, Tran LQ, Chow J, Kim J, Hauser SE, Moon CW, Thoma GR
|
| Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001. |
| (Abstract) (PDF)
|
|
| Automatic Indexing by Discipline and High-Level Categories: Methodology and Potential Applications |
Humphrey SM, Rindflesch TC, Aronson AR
|
| Advances in classification research. Proc. of the 11th ASIST SIG/CR Classification Research Workshop. 2001. |
| (Abstract) (PDF)
|
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| Automatic MeSH Term Assignment and Quality Assessment |
Kim W, Aronson AR, Wilbur WJ
|
| Proc AMIA Symp. 2001 ;():319-23. |
| (Abstract) (PDF)
(PMID: 11825203
) |
|
| Bridging Two Biomedical Journal Databases with XML - A Case Study |
|
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| Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001 Jul;:309-14. |
| (Abstract) (PDF)
|
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| Circular Hierarchical Relationships in the UMLS: Etiology, Diagnosis, Treatment, Complications, and Prevention |
|
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| Proc AMIA Symp. 2001 ;():57-61. |
| (Abstract) (PDF)
(PMID: 11825155
) |
|
| Comparing Terms, Concepts and Semantic Classes in WordNet and the Unified Medical Language System |
|
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| Proc. of the NAACL'2001 Workshop; WordNet and Other Lexical Resources: Applications, Extensions and Customizations. 2001;:77-82. |
| (Abstract) (PDF)
|
|
| Computer Assisted Pedicle Screw Trajectory Guidance Using Fused Deposition Modeling |
Morris J, Yoo TS, Chen D, Burgess J, Richardson AC
|
| Computer Assisted Pedicle Screw Trajectory Guidance Using Fused Deposition Modeling. 2001. |
|
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| Computer-Assisted Retrieval of Biomedical Image Features from Spine X-Rays: Progress and Prospects |
|
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| Proceeding of the 14th IEEE Symposium on Computer-Based Medical Systems (CBMS). 2001 Jul;:46-50. |
| (Abstract) (PDF)
|
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| Computer Briefs: POTS and Other Channels |
|
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| J. Med. Pract. Management. 2001; 17(2):112-113. |
| (Abstract) (PDF)
|
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| Design Considerations for Multimedia Programs |
|
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| Models and Strategies for Training Design, Silver Spring, Maryland, International Society for Performance Improvement. 2001;:355 373. |
| (Abstract) (PDF)
|
|
| Developing a Test Collection for Biomedical Word Sense Disambiguation |
Weeber M, Mork JG, Aronson AR
|
| Proc AMIA Symp. 2001 ;():746-50. |
| (Abstract) (PDF)
(PMID: 11825285
) |
|
| Effective Mapping of Biomedical Text to the UMLS Metathesaurus: The MetaMap Program |
|
|
| Proc AMIA Symp. 2001 ;():17-21. |
| (Abstract) (PDF)
(PMID: 11825149
) |
|
| Effects of Link Annotations on Search Performance in Layered and Unlayered Hierarchically Organized Information Spaces |
|
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| Journal of the American Society for Information Science and Technology. 2001;52(14):1255-1261. |
| (Abstract) (PDF)
|
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| Empirical Performance Evaluation Methodology and its Application to Page Segmentation Algorithms |
|
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| IEEE Transactions on Pattern Analysis and Machine Intelligence. 2001 Mar;23(3): 242-256. |
| (Abstract) (PDF)
|
|
| Estimation of Orientation and Position of Cervical Vertebrae for Segmentation with Active Shape Models |
Zamora G, Sari-Sarraf H, Mitra S, Long LR
|
| Proc. SPIE Medical Imaging: Image Processing. 2001 Feb;4322:378-87. |
|
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| Evaluating UMLS Strings for Natural Language Processing |
McCray AT, Bodenreider O, Malley JD, Browne AC
|
| Proc AMIA Symp. 2001 ;():448-52. |
| (Abstract) (PDF)
(PMID: 11825228
) |
|
| Feature Indexing in a Database of Digitized X-Rays |
|
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| Proc. of SPIE Storage and Retrieval for Media Databases. 2001 Jan;4315:393-403. |
| (Abstract) (PDF)
|
|
| From Data to Knowledge - The Visible Human Project Continues |
Ackerman MJ, Yoo T, Jenkins D
|
| Proceedings of Medinfo 2001, IOS Press. 2001;:887-891. |
| (Abstract) (PDF)
|
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| From Transfer Functions to Level Sets: Advanced Topics in Volume Image Processing |
|
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| Ed. 2001. From Transfer Functions to Level Sets: Advanced Topics in Volume Image Processing. Tutorial Notes for IEEE Vis. 2001;:100. |
| (Abstract) (PDF)
|
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| Identification and Classification of Spine Vertebrae by Automated Methods |
|
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| Proc. SPIE Medical Imaging: Image Processing. 2001 Feb;:1478-89. |
| (Abstract) (PDF)
|
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| Implicit Snakes: Active Constrained Implicit Models |
|
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| MICCAI 2001;: 1379-1381. |
| (Abstract) (PDF)
|
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| Interpolating Implicit Surfaces From Scattered Surface Data Using Compactly Supported Radial Basis Functions |
Morse B, Yoo TS, Rheingans P, Chen DT, Subramanian KR
|
| Proc. of the International Conference on Shape Modeling and Applications (SMI2001). Robert Werner, ed., IEEE Computer Society Press. 2001;:89-98. |
| (Abstract) (PDF)
|
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| John Mahoney and the Introduction of Penicillin to Treat Syphilis |
|
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| Pharmacy in History. 2001; 43: 3-13. |
| (Abstract) (PDF)
|
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| Landmarking and Feature Localization in Spine X-Rays |
|
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| Journal of Electronic Imaging. 2002 Oct; 10(4):939-56. |
| (Abstract) (PDF)
|
|
| Lexically-Suggested Hyponymic Relations Among Medical Terms and Their Representation in the UMLS |
Bodenreider O, Burgun A, Rindflesch TC
|
| Proc. of TIA'2001; Terminology and Artificial Intelligence. 2001;:11-21. |
| (Abstract) (PDF)
|
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| Mapping the UMLS Semantic Network into General Ontologies |
|
|
| Proc AMIA Symp. 2001 ;():81-5. |
| (Abstract) (PDF)
(PMID: 11833483
) |
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| Methods for Exploring the Semantics of the Relationships Between Co-Occurring UMLS Concepts |
|
|
| Medinfo. 2001 ;10(Pt 1):171-5. |
| (Abstract) (PDF)
(PMID: 11604727
) |
|
| NGI and Internet2: Accelerating the Creation of Tomorrow's Internet |
Kratz M, Ackerman M, Hanss T, Corbato S
|
| MEDINFO 2001 V. Patel et al. (Eds) Amsterdam: IOS Press, IMIA. 2001. |
| (Abstract) (PDF)
|
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| Pattern Matching Techniques for Correcting Low Confidence OCR Words in a Known Context |
Ford G, Hauser SE, Le DX, Thoma GR
|
| Proc. SPIE., Document Recognition and Retrieval VIII. 2001 Jan;4307:241-9. |
| (Abstract) (PDF)
|
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| Principles for Digital Library Development |
|
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| Communications of the ACM. 2001 May; 44(5): 48-54. |
| (Abstract) (PDF)
|
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| Proteus: A Model for Clinical Protocols Created from Knowledge Components |
|
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| Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001 Jul;:59-64. |
| (Abstract) (PDF)
|
|
| Public Health Service, Militarization of the PHS Commissioned Corps |
|
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| Militarization of the PHS Commissioned Corps. 2001 Sept. |
| (Abstract) (PDF)
|
|
| Relationships Among Knowledge Structures: Vocabulary Integration Within a Subject Domain |
|
|
| Relationships in the organization of knowledge: Kluwer. 2001;:81-98. |
| (Abstract) (PDF)
|
|
| Stochastic Language Models for Automatic Acquisition of Lexicons from Printed Bilingual Dictionaries |
|
|
| Document Layout Interpretation and Its Application. 2001. |
| (Abstract) (PDF)
|
|
| Template Guided Intervention: Interactive Visualization and Design for Medical Fused Deposition Models |
Yoo TS, Morris J, Chen DT, Burgess J, Richardson AC
|
| Proc. of the Workshop Interactive Medical Image Visualization and Analysis (18 October 2001, Utrecht, the Netherlands Germany). 2001;:45-48. |
| (Abstract) (PDF)
|
|
| The Contributions of David L. Cowen |
|
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| Publ Am Inst Hist Pharm. 2001;19:1-3. |
|
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| Toward Validation Databases for Medical Imaging: Engineering a Scientific Rendezvous |
|
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| In Proc. of VISIM Workshop on Information Retrieval and Explorations from Large Medical Image Collections & Innovations in Medicine. 2001 Oct;:7-10. |
| (Abstract) (PDF)
|
|
| Web Page Downloading and Classification |
Tran LQ, Moon CW, Le DX, Thoma GR
|
| Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001 Jul;:321-6. |
| (Abstract) (PDF)
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| Year 2000 | Back to top |
| Advances Toward Understanding of Multimodal Volume Data |
|
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| Proc. of Highcare. 2000 Feb. |
| (Abstract) (PDF)
|
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| A New Research Program in Medical Image Processing |
|
|
| Stud. Health Technol. Inform. 2000;70:385-91. |
| (Abstract) (PDF)
|
|
| Application of Planar Motion Segmentation for Scene Text Extraction |
Gandhi T, Kasturi R, Antani S
|
| Proc. of the 15th IEEE International Conference of Pattern Recognition. 2000 Sept.;1:1831-4. |
| (Abstract) (PDF)
|
|
| Argument Identification for Arterial Branching Predications Asserted in Cardiac Catheterization Reports |
Rindflesch TC, Bean CA, Sneiderman CA
|
| Proc AMIA Symp. 2000 ;():704-8. |
| (Abstract) (PDF)
(PMID: 11079975
) |
|
| A Semantic Navigation Tool for the UMLS |
|
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| Proc. of AMIA Annual Symposium. 2000;: 971. |
| (Abstract) (PDF)
|
|
| Automated Zone Correction in Bitmapped Document Images |
Hauser SE, Le DX, Thoma GR
|
| SPIE: Document Recognition and Retrieval VII. 2000 Jan;3976: 248-58. |
| (Abstract) (PDF)
|
|
| Automatic Indexing by Discipline and High-Level Category: Methodology and Potential Applications |
Humphrey S, Rindflesch TC, Aronson AR
|
| Proc. of the 11th SIG/CR Classification Research Workshop. 2000;:103-16. |
| (Abstract) (PDF)
|
|
| Automatic Training of Page Segmentation Algorithms: An Optimization Approach |
|
|
| International Conference on Pattern Recognition. 2000 Sept.;:531-534. |
| (Abstract) (PDF)
|
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| Better Access to Information About Clinical Trials |
|
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| Ann Intern Med. 2000 Oct 17;133(8):609-14. |
| (Abstract) (PDF)
(PMID: 11033590
) |
|
| Comment les Usagers Accedent a l'Information Medicale Aux USA: l'Exemple de MEDLINEplus [How Consumers Access Health Information in the USA: The MEDLINEplus Example] |
|
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| Innovation et Technologie en Biologie et Medecine. 2000;21(5):286-90. |
| (Abstract) (PDF)
|
|
| Computer Briefs: Virtual Reality |
|
|
| J. Med.Pract. Management. 2000;15(6):304-305. |
| (Abstract) (PDF)
|
|
| Computer Briefs: Welcome to the New Millennium |
|
|
| J. Med. Pract. Management. 2000;15(4):211-212. |
| (Abstract) (PDF)
|
|
| De la Classification à la Connaissance des Maladies: Une Réflexion à Partir de la Classification Internationale des Maladies [From Classification to Knowledge About Diseases: Thoughts about the International Classification of Diseases] |
Botti G, Bodenreider O, Burgun A, Le Beux P, Fieschi M
|
| Innovation et Technologie en Biologie et Médecine. 2000;21(5):291-97. |
|
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| Design and Implementation of a National Clinical Trials Registry |
|
|
| J Am Med Inform Assoc. ;7(3):313-23. |
| (Abstract) (PDF)
(PMID: 10833169
) |
|
| Developing Web Browser Recording Tools Using Server-Side Programming Technology |
Lu CJ, Bangalore A, Tse T
|
| Proc. of WebNet 2000, World conference on WWW and Internet: Association for the Advancement of Computing in Education. 2000;:372-7. |
| (Abstract) (PDF)
|
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| Discovering Missed Synonymy in a Large Concept-Orientated Methathesaurus |
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| Proc AMIA Symp. 2000 ;():354-8. |
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(PMID: 11079904
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| EDGAR: Extraction of Drugs, Genese, and Relations from the Biomedical Literature |
Rindflesch TC, Tanabe L, Weinstein JN, Hunter L
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| Pac Symp Biocomput. 2000 ;():517-28. |
| (Abstract) (PDF)
(PMID: 10902199
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| Effect of Image Compression on Telepathology; A Randomized Clinical Trial |
Marcelo A, Fontelo P, Parolan M, Cualing H
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| Proc. AMIA Symp. 2000;:354-8. |
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| Electronics and Health Care Revisited: Thirty-Eight Years Later |
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| Proc. IEEE. 2000;88(5):706-707. |
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| Empirical Performance Evaluation of Page Segmentation Algorithms |
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| SPIE conference on Document Recognition and Retrieval. 2000 Jan.;:303-314. |
| (Abstract) (PDF)
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| Extracting Molecular Binding Relationships from Biomedical Text |
Rindflesch TC, Rajan J, Hunter L
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| Proc. of the 6th Applied Natural Language Processing Conference. 2000;: 188-95. |
| (Abstract) (PDF)
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| Extracting the Lowest-Frequency Words: Pitfalls and Possibilities |
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| Computational Linguistics. 2000;26(3):301-17. |
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| Identifying Proper Names in Parallel Medical Terminologies |
Bodenreider O, Zweigenbaum P
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| Stud Health Technol Inform. 2000 ;77():443-7. |
| (Abstract) (PDF)
(PMID: 11187591
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| Imaging Outcomes from the National Library of Medicine's Visible Human Project |
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| Comput Med Imaging Graph. ;24(3):125-6. |
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| Indexing of Image Content in Spine X-Rays |
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| Proc. of SPIE Storage and Retrieval for Image and Video Databases VIII. 2000 Jan;3972:55-63. |
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| Is 21st Century E-Health Care Really Self Care? |
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| J. Med. Pract. Management. 2000;16(2): 108-109. |
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| Modelling Syllepse in Medical Knowledge Bases with Application in the Domain of Organ Failure and Transplantation |
Jacquelinet C, Bodenreider O, Burgun A
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| Proc. of OntoLex; Workshop on Ontologies and Lexical Knowledge Bases 2000. |
| (Abstract) (PDF)
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| Page Layout Classification Technique for Biomedical Documents |
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| Proc. World Multiconference on Systems, Cybernetics and Informatics (SCI). 2000 Jul.;X: 348-52. |
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| PSET: A Page Segmentation Evaluation Toolkit |
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| Fourth IAPR International Workshop on Document Analysis Systems. 2000 Dec.;:451-462. |
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| Read it to Me! |
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| Proc. 21st National Online Meeting. 2000 May;: 473-83. |
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| Robust Extraction of Text in Video |
Antani S, Crandall D, Kasturi R
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| International Conference of Pattern Recognition. 2000 Sept.;1:1445-9. |
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| Searching for Biomedical Information on the World Wide Web |
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| J Med Pract Management ;15(6):306-13. |
| (Abstract) (PMID: 11183455
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| Segmentation and Image Navigation in Digitized Spine X-Rays |
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| Proc. SPIE Medical Imaging: Image Processing. 2000 Feb; 3979: 168-79. |
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| Some Connectivity and Security Issues of NGI in Medical Imaging Applications |
Fan Y, Hwang K, Gill M, Huang HK
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| Journal of High Speed Networks. 2000;9: 3-13. |
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| Strategies d'Identification des Noms Propres a Partir de Nomenclatures Medicales Paralleles |
Bodenreider O, Zweigenbaum P
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| Traitement Automatique des Langues. 2000;41(3):727-757. |
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| System Expansion and Integration with Agents in HSTAT |
Xiaocheng L, Prettyman M, Antonucci R
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| Proc. of the World Multiconference on Systemics, Cybernetics, and Informatics. 2000 Jul.;: 2000. |
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| Text-Based Discovery in Biomedicine: The Architecture of the DAD-System |
Weeber M, Klein H, Aronson AR, Mork JG, de Jong-van den Berg LT, Vos R
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| Proc AMIA Symp. 2000 ;():903-7. |
| (Abstract) (PDF)
(PMID: 11080015
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| The NLM Indexing Initiative |
Aronson AR, Bodenreider O, Chang HF, Humphrey SM, Mork JG, Nelson SJ, Rindflesch TC, Wilbur WJ
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| Proc AMIA Symp. 2000 ;():17-21. |
| (Abstract) (PDF)
(PMID: 11079836
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| The Other Pharmacists in the American Civil War |
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| Am J Health Syst Pharm. 2000 Jul 1;57(13):1276. |
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| The Pharmaceutical Sciences in America, 1852-1902 |
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| Journal of the American Pharmaceutical Association. 2000;40 (2000): 733-735. |
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| The Visible Human Project: From Data to Knowledge |
Ackerman MJ, Yoo T, Jenkins D
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| Computer Assisted Radiology and Surgery. 2000;:11-16. |
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| Toward a Common Validation Methodology for Segmentation and Registration Algorithms |
Yoo TS, Ackerman MJ, Vannier M
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| MICCAI. 2000;: 422-431. |
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| Towards Efficient XML Query Processing, XML |
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| Developer Day in XML 2000: Graphic Communications Association. 2000;:1-45. |
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| Usability Issues in Developing a Web-Based Consumer Health Site |
McCray AT, Dorfman E, Ripple A, Ide NC, Jha M, Katz DG, Loane RF, Tse T
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| Proc AMIA Symp. 2000 ;():556-60. |
| (Abstract) (PDF)
(PMID: 11079945
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| Use of Shape Models to Search Digitized Spine X-Rays |
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| IEEE Computer-Based Medical Systems. 2000 June;: 255-60. |
| (Abstract) (PDF)
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| Using UMLS Semantics for Classification Purposes |
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| Proc AMIA Symp. 2000 ;():86-90. |
| (Abstract) (PDF)
(PMID: 11079850
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| Web-Based Document Image Processing |
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| Proc. SPIE: Internet Imaging. 2000 Jan;:268-77. |
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