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IMAGEJ archives -- March 2007 (#28)

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Thread-Topic: How to do frame averaging?
Thread-Index: AcdeafGrINRp7HeQTHmLP0taZEU6XwAFaVog
Message-ID:  <[log in to unmask]>
Date:         Sun, 4 Mar 2007 12:12:45 -0500
Reply-To:     ImageJ Interest Group <[log in to unmask]>
Sender:       ImageJ Interest Group <[log in to unmask]>
From:         Tony Collins <[log in to unmask]>
Subject:      Re: How to do frame averaging?

There's Nico Stuurman's Running Zprojector plugin:
http://valelab.ucsf.edu/~nico/IJplugins/Running_ZProjector.html
(You can think of it as a Running TProjector also - sometimes ImageJ
assumes the third dimension is Z but it can equally be T, e.g. "Plot
Z-axis profile" is the same as "Plot intensity vs time").

Have a look at Christopher Philip Mauer's Kalman Filter plugin too.
http://rsb.info.nih.gov/ij/plugins/kalman.html

Regards,
Tony

Tony J. Collins, Ph.D.
McMaster Biophotonics Facility
Dept. Biochemistry and Biomedical Sciences HSC 4H21A
McMaster University, Hamilton, ON, L8N 3Z5
(905) 525 9140 x28812(off.)/x26488(lab)
[log in to unmask]     www.macbiophotonics.ca

> -----Original Message-----
> From: ImageJ Interest Group [mailto:[log in to unmask]] On Behalf Of
> Mikinka
> Sent: Sunday, March 04, 2007 7:45 AM
> To: [log in to unmask]
> Subject: How to do frame averaging?
> 
> Hi all,
> 
> I am doing live cell imaging and I would like to do frame averaging
such
> as
> getting average of 30 image frames to improve signal to background
noise
> ratios. I'm new to ImageJ. Any help would be greatly appreciated.
> 
> Thanks!
> Mikinka
> 
> --
> View this message in context: http://www.nabble.com/How-to-do-frame-
> averaging--tf3342300.html#a9295533
> Sent from the ImageJ mailing list archive at Nabble.com.

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