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Network News
March/April 2001

Bimonthly Newsletter from the South Central Region
National Network of Libraries of Medicine

Contents:
News From the NN/LM SCR Office
What's New in PubMed
NLM Announces Institutional Training Grants for Informatics Research
Public Access to the Human Genome
DOCLINE Update
Interactive Health Tutorials

News From the NN/LM SCR Office

Beginnings and endings�spring is the sign of rebirth, and we in the NN/LM SCR Office are in the final stages of the 1996 � 2001 RML contract, with the beginning of the 2001 - 2006 contract on the horizon. Negotiations have gone well and we look forward to presenting a strong program to the region over the next five years. We appreciate the support of all of you in Arkansas, Louisiana, New Mexico, Oklahoma, and Texas.

At this time, I would like to publicly thank the NN/LM SCR staff for their support and participation in helping us regain and maintain momentum over the past two years so that we could provide quality service to the region. We look forward to serving you as your Regional Medical Library during 2001 - 2006. Please continue to let us know if we can assist you in any way. End of Story

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What's New in PubMed

PubMed Tutorial

A Web based interactive PubMed tutorial is now available from the blue menu sidebar on the PubMed Web site. This tutorial is based on the PubMed portion of NLM's Keeping Up with NLM's PubMed, the NLM Gateway and ClinicalTrials.gov course that is taught throughout the country. The latest version of the workbook for this course can be found at: http://www.nlm.nih.gov/pubs/web_based.html

For more information see Zipser, JR., At your Desktop: the PubMed Interactive Tutorial. NLM Tech Bull. 2001 Mar-Apr;(319):e2 (http://www.nlm.nih.gov/pubs/techbull/ ma01/ma01_tutorial.html).

Linkout

Now libraries can be included in the LinkOut program. LinkOut is the PubMed feature that allows publishers and aggregators to display the links to full text and other resources you see on PubMed citations. LinkOut for Libraries enables libraries to display their icons on the Abstract and Citation formats in PubMed. This allows patrons of participating libraries to see which articles they can obtain electronically in full text and link to them directly.

To participate, a library must submit "electronic" holdings data to NLM. Important information and instructions for participating in the LinkOut for Libraries program can be found at http://www.ncbi.nlm.nih.gov/entrez/query/ static/liblinkout.html

For more information see Nahin AM, Canese K., LinkOut for Libraries Now Available. NLM Tech Bull. 2001 Mar-Apr;(319):e7 (http://www.nlm.nih.gov/ pubs/techbull/ma01/ma01_linkout.html).

Document Delivery Services Added

PubMed's Order button, which is used to order documents via Loansome Doc, now can access other document delivery services. Currently two commercial services, Infotrieve and Mediscope, are available. NLM expects more services to be added in the future.

To change to another service in PubMed, you must register for Cubby and use Cubby's Document Delivery Services option. When first accessing PubMed, the default will remain Loansome Doc until you logon to Cubby. Then the default will change to your chosen document delivery service. End of Story

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NLM Announces Institutional Training Grants for Informatics Research

As it does every five years, NLM announces an open competition for Institutional Training Grants for Research Training in Informatics. Information about the Request for Applications can be found at http://grants.nih.gov/grants/guide/rfa-files/RFA-LM-01-001.html .

Applications are due at the National Institutes of Health by June 22, 2001. NLM expects to fund approximately 15 programs for five-year grants starting July 1, 2002. The 12 existing programs are eligible to apply for renewal.

Although NLM's basic format for these programs is similar to those in previous competitions, the current RFA requires increased attention to details of the core curriculum, and a distinct emphasis on incorporation of the informatics of biomedical research.

NLM's training programs have played an important role in providing informaticians for the nation for almost two decades. Please call the RFA to the attention of any who might be interested in applying. End of Story

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Public Access to the Human Genome

The DNA sequence of the Human Genome is now freely accessible to all, for public or private use, from the National Center for Biotechnology Information (NCBI). The Web address for the Human Genome home page is: http://www.ncbi.nlm.nih.gov/genome/guide/human. NCBI's Web site serves as an integrated, one-stop, genomic resource for biomedical researchers around the world. Using search and analysis tools developed at NCBI, scientists can, for example:

  • find a gene's location in the genome
  • find other genes in the same region
  • correlate many diseases to genes
  • find out if a similar gene exists in another organism
  • see genetic variations

The Human Genome data can be downloaded in its entirety, chromosome by chromosome, in segments referred to as �contigs� (for �contiguous sequence�). This data, along with information about the location of genes and other biological features associated with the sequence, is available from NCBI's public FTP site.

For more information and sample searches illustrating how NCBI tools used for scientific discovery, see the Introduction to NCBI's Genome Resource or Take a Tour of the Draft Human Genome, both at the Human Genome Web site. End of Story

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DOCLINE Update

July-September Quarterly Reports

The July-September, 2000 DOCLINE quarterly statistical reports are now available. To view, print or download the report, go the Requests Module in DOCLINE and click on Reports. Then click on the individual reports.

In reviewing these reports, please keep in mind that data from the old DOCLINE system was converted to the new system to ensure complete reports for the July-September 2000 quarter. Unfortunately, combining the data resulted in some anomalies in the reports. For example, one or two requests were lost on some but not on all reports.

A summary description of the quarterly reports as well as information on printing and saving these reports may be found at http://www.nlm.nih.gov/ docline/docline_manual/requests/statisticalreports.html.

The October-December 2000 quarterly reports should be available soon. Users will continue to have access to the July-September 2000 quarterly reports until the January-March 2001 reports are released.

Internet Explorer 5.5

Many users have asked about the support of Internet Explorer 5.5 with DOCLINE. During NLM's testing of IE 5.5, they encountered a 'known' Internet Explorer bug that occurs on PCs that have upgraded from an earlier version. In DOCLINE, the problem is evident by the "Runtime Error has occurred' message received upon trying to read the Online Help or the FAQs. NLM and RML administrative functions are also affected. The problem also occurs on non-DOCLINE web sites as secondary windows are opened by an application.

The problem has no known fix or workaround when it occurs. On the machines upgraded at NLM, roughly half of the machines are affected. The only solution is to re-build the machine and install IE from scratch. For most organizations, this solution is not appealing.

Separate from the Microsoft upgrade issue, many users have reported a problem printing receipts with IE 5.5. The reported behavior ranges from printing an extra page with each set of requests to no data printing. This is due to a change in the frame behavior of IE between 5.01 and 5.5.

NLM is awaiting further word from Microsoft technical support on the problem introduced by the IE upgrade process. Microsoft has not given an estimate for a resolution. Once NLM has additional information of a workaround or fix, they will implement and test again. They plan to resolve the problem with printing of receipts at the same time. Until then, DOCLINE continues to be compatible with Netscape 4.51, 4.6, or 4.7 and IE 4.0 or IE 5.01. End of Story

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Interactive Health Tutorials

MEDLINEplus now includes a series of education modules called Interactive Health Tutorials (http://www.nlm.nih.gov/medlineplus/tutorials.html). Created by the Patient Education Institute (PEI) and modified to NLM specifications, these tutorials help consumers use an interactive tool to learn about health issues. The tutorials are about ten minutes long and use graphics (animation, sound, pictures) to engage the user. There are 30 topics covered.

Interactive Health Tutorials

These topics include four different categories:

  1. Diseases and conditions
  2. Tests and diagnostics
  3. Surgery and treatment
  4. Modules in Spanish on diabetes and hypertension

The information uses straightforward and easy-to-read language. Illustrations are used to aid in understanding. The user is prompted by questions throughout the tutorial (mostly true or false) and must answer correctly to move on. The questions review the information provided up to that point, thus enhancing the interactive learning experience.

Example of Questions

To run the tutorials, a Flash plug-in, version 4 or higher, is required. If a computer does not already have this software, there is an automatic prompt to download a free version of it. Sound is not needed to understand and use the tutorial but is very beneficial for the health consumer with a low reading level. Also, if using the Flash plug-in is not possible, there are full-text, print versions of all the modules available in .pdf format. End of Story

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Published bimonthly by the
National Network of Libraries of Medicine, South Central Region
Supported by NLM Contract NO1-LM-6-3523

NN/LM SCR Board Chair
Holly Buchanan
Network News Editor
Ruicha Mishra

Houston Academy of Medicine-Texas Medical Center Library
1133 M.D. Anderson Blvd
Houston, TX 77030-2809
Phone: 800-338-7657 or 713-799-7880
Fax: 713-790-7030
nnlmscr@library.tmc.edu

http://nnlm.gov/scr/scnn/mar_ap01/text.htm