CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. C12orf10, Chromosome 12 open reading frame 10
Sequence ID:NM_021640

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 51983111 - 51987221

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4454943Full LengthBC028904chromosome 12 open reading frame 10
5170816Full LengthBC051871chromosome 12 open reading frame 10
3507558IncompleteBC013956chromosome 12 open reading frame 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067653  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_021640 NP_067653 Q86UA3 UPF0160

Related Sequences

 
mRNAGenPeptSwissProt
AF289485 AAG17847 Q9HB07
BC013956 AAH13956 Q96CT6
BC028904 AAH28904 Q8WYI2
BC051871 AAH51871 Q86UA3
AF111805 AAL39007 Q8WYI2
AK293449 BAG56948  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C12orf10 NP_067653 R.norvegicus Myg1 300258   NP_001005545 88
M.musculus Myg1 60315 Gene Info NP_068359 88
M.grisea MGG_07266 2683012   XP_367341 54
N.crassa NCU03859.1 2705295   XP_323178 51
S.pombe SPAC694.04c 2543308   NP_594484 50
A.thaliana AT5G41970 834202   NP_199012 50
C.elegans C27H6.8 179392   NP_741610 49
A.gambiae AgaP_AGAP002408 1273554   XP_312544 48
S.cerevisiae YER156C 856900   NP_011083 46
D.melanogaster CG11980 41078   NP_731302 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.