CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. GATC, Glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)
Sequence ID:NM_176818

Database Links

UniGeneEntrez GeneDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 119368629 - 119383772

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40031296Full LengthBC107145glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)
4822098IncompleteBC034962hypothetical protein LOC283459
5588592IncompleteBC064523glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)
6200931IncompleteBC047778hypothetical protein LOC283459
40031298IncompleteBC107146glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_789788  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_003769 NP_003760 Q13242 RRM_1
NM_176818 NP_789788 O43716 Glu-tRNAGln

Related Sequences

 
mRNAGenPeptSwissProt
U30825 AAA93069 Q13242
BC093971 AAH93971 Q13242
BC093973 AAH93973 Q13242
BC107145 AAI07146 O43716
BC107146 AAI07147 O43716
AK290644 BAF83333 A8K3M9
AK094319 BAG52859 B3KSU7

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GATC NP_789788 M.musculus Gatc 384281 Gene Info NP_083921 76
R.norvegicus Gatc 360821   XP_341096 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.