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Gene Info

Gene Information For:Hs. FAM40A, Family with sequence similarity 40, member A
Sequence ID:NM_033088

Database Links

UniGeneEntrez GeneDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 110378780 - 110398778

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30342169Full LengthBC094786family with sequence similarity 40, member A
40108345Full LengthBC121793family with sequence similarity 40, member A
40108348Full LengthBC119814family with sequence similarity 40, member A
4695803IncompleteBC067239family with sequence similarity 40, member A
4999548IncompleteBC019919family with sequence similarity 40, member A
5521489IncompleteBC032644family with sequence similarity 40, member A
5740070IncompleteBC040142family with sequence similarity 40, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149079  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_033088 NP_149079 Q5VSL9 N1221

Related Sequences

 
mRNAGenPeptSwissProt
BC019919 AAH19919 Q8WUN4
BC032644 AAH32644 Q5VSL9
BC094786 AAH94786 Q5VSL9
BC119814 AAI19815 Q5VSL9
BC121793 AAI21794 Q5VSL9
AB051548 BAB21852 Q5VSL9
AK027649 BAB55265 Q5VSL9
AK125054 BAC86034 Q5VSL9
AK125944 BAC86354 Q6ZU72
AK291059 BAF83748 A8K4U4
AL834196 CAH56368 Q5VSL9

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FAM40A NP_149079 M.musculus 6330569M22Rik 229707 Gene Info NP_705791 98
R.norvegicus Fam40a 362012   XP_342312 98
A.gambiae AgaP_AGAP007902 1278053   XP_317581 57
D.melanogaster CG11526 38412   NP_647806 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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