CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Mm. Adamts16, A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
Sequence ID:NM_172053

Database Links

UniGeneEntrez GeneSNPViewerAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C1|13 42.0

Chromosomal Position (from UCSC)

Chromosomal Position:13: 70866687 - 70980653

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4951547Full LengthBC034739a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
5345901IncompleteBC046506a disintegrin-like and metallopetidase (reprolysin type) with thrombospondin type 1 motif, 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_742050  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_172053 NP_742050 Q69Z28 TSP_1
Reprolysin
Pep_M12B_propep
ADAM_spacer1

Related Sequences

 
mRNAGenPeptSwissProt
BC034739 AAH34739 Q69Z28
AK173338 BAD32616 Q69Z28

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adamts16 NP_742050 R.norvegicus Adamts16 306664   XP_225142 93
H.sapiens ADAMTS16 170690 Gene Info NP_620687 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.