Tutorials and Other Information
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Tutorials
Sequence quality control explains several common problems with sets of viral sequences How to make a phylogenetic tree explains how to build a phylogenetic tree HIV and SIV subtype nomenclature explains HIV and SIV subtype nomenclature, particularly the HIV-1 groups and subtypes How to use these databases workshop given at 11th Conference on Retroviruses and Opportunistic Infections in February 2004 Tutorials planned for the future
Consensus sequences
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Articles and information
Circulating recombinant forms (CRFs) gives details about all documented CRFs of HIV-1 3D views of HIV macromolecular structures provides links to 3D views of HIV proteins HIV-1 gene map illustrates the genes/proteins of HIV-1, including HXB2 breakpoints Subtypes in the primate immunodeficiency viruses a brief overview of subtypes of HIV-1, HIV-2, and SIV, particularly the abbreviations used to annotated the SIVs How the HIV database classifies sequences explains how recombinants are named and annotated Common sequence formats for alignments shows examples of common sequence formats for alignments Stalking the AIDS Virus [PDF] article from LANL Research Quarterly (Fall 2003) about HIV Database research aimed at understanding the interaction between HIV and the immune system as a step toward an AIDS vaccine How to cite this Database explains how to cite this website and the printed HIV compendia FAQs frequently-asked questions about the HIV Sequence Database Links HIV/AIDS resources on other websites |