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HIV sequence database



Heatmap

Purpose: A heatmap is a graphical way of displaying a table of numbers by using colors to represent the numerical values. For example, low values might tend towards cool blue tones while higher values tend to hotter orange and red tones. Heatmaps also re-arrange the rows and columns of the table so that similar rows, and similar columns, are grouped together, with their similarity represented by a dendogram (separate dendograms for rows and for columns). This webtool uses the heatmap tool, "heatmap.2" of the gplots package of the statistical environment R: A Language and Environment for Statistical Computing.

For more details see the Heatmap Explanation.

Input

Paste your data here

[Sample Input]
Or upload a data file
Use log data? Cluster Method:
Output Format: Heatmap Palette: Bottom Margin: Right Margin:
Nbr Colors: Column Label Size: Row Label Size:
Cluster Distance Method:
Bootstrap Distance Method: Iterations:


This web site was sponsored in part by the Collaboration for AIDS Vaccine Discovery through the CA-VIMC, PI David Montefiori

We thank the Bill & Melinda Gates Foundation and their support of the
Collaboration for AIDS Vaccine Discovery (CAVD) - a component of the Global HIV Vaccine Enterprise.

Bill & Melinda Gates Foundation The Collaboration for AIDS Vaccine Discovery (CAVD) The Global HIV Vaccine Enterprise

last modified: Wed Jul 2 14:40 2008


Questions or comments? Contact us at seq-info@lanl.gov.