DOE Joint Genome Institute
Latest News
September 8, 2008
DOE JGI Extends the Capabilities of the Integrated Microbial Genome (IMG) System, Updates the IMG/M Metagenome System, Launches Education Site
The U.S. Department of Energy Joint Genome Institute (DOE JGI) has extended the capabilities of the Integrated Microbial Genomes (IMG) data management system, updated the content of the IMG/M metagenome data management and analysis system, and has launched its educational companion site, IMG/EDU.
August 21, 2008
Genome of Simplest Animal Reveals Ancient Lineage, Confounding Array of Complex Capabilities
As Aesop said, appearances are deceiving—even in life’s tiniest critters. From first detection in the 1880s, clinging to the sides of an aquarium, to its recent characterization by the U.S. Department of Energy Joint Genome Institute (DOE JGI), a simple and primitive animal, Trichoplax adhaerens, appears to harbor a far more complex suite of capabilities than meets the eye. The findings, reported in the August 21 online edition of the journal Nature, establish a group of organisms as a branching point of animal evolution and identify sets of genes, or a “parts list,” employed by organisms that have evolved along particular branches.
August 20, 2008
Gut Reactions
The termite’s stomach, of all things, has become the focus of large-scale scientific investigations. Could the same properties that make the termite such a costly pest help us solve global warming?
August 18, 2008
Analysis of Lake Washington Microbes Shows the Power of Metagenomic Approaches
Today’s powerful sequencing machines can rapidly read the genomes of entire communities of microbes, but the challenge is to extract meaningful information from the jumbled reams of data. In a paper appearing in Nature Biotechnology August 17, a collaboration headed by researchers at the University of Washington and the U.S. Department of Energy Joint Genome Institute (DOE JGI) describes a novel approach for extracting single genomes and discerning specific microbial capabilities from mixed community (“metagenomic”) sequence data.
The U.S. Department of Energy Joint Genome Institute, supported by the DOE Office of Science, unites the expertise of five national laboratories—Lawrence Berkeley, Lawrence Livermore, Los Alamos, Oak Ridge, and Pacific Northwest—along with the Stanford Human Genome Center to advance genomics in support of the DOE missions related to clean energy generation and environmental characterization and cleanup. JGI is operated by the University of California for the U.S. Department of Energy.
Releases
- September 8, 2008
Acidithiobacillus ferrooxidans ATCC - August 20, 2008
Anaeromyxobacter sp. K
Geobacter bemidjiensis Bem - August 18, 2008
Chlorobaculum parvum NCIB
Chloroherpeton thalassium ATCC - August 13, 2008
Hydrogenobaculum sp. Y04AAS1
Rhodopseudomonas palustris TIE-1 - August 11, 2008
Chthoniobacter flavus Ellin428
Cyanothece sp. PCC 7822
Thermus aquaticus Y51MC23 - August 8, 2008
Ostreococcus RCC809 - July 25, 2008
Pelodictyon phaeoclathratiforme BU-1
Prosthecochloris aestuarii DSM 271
Stenotrophomonas maltophilia R551-3
- July 21, 2008
Clostridium thermocellum DSM 4150
Cyanothece sp. PCC 7425
Cyanothece sp. PCC 8802
Geobacillus sp. G11MC16