TRIad Multi-Marker

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Research Resources for Scientists Software Electron Spin Resonance Software Database Expression Predictor (ExP) Extracting Patterns and Identifying co-expressed Genes (EPIG) fdrMotif GA/KNN GADEM Genetic Algorithm Method for Optimizing a Position Weight Matrix Hybrid Design Modk-Prototypes mPopTag NMR NOE Simulations NMR Scripts NvAssign ORIOGEN v 2.2 - Order Restricted Inference for Ordered Gene Expression PCR Analyzer Phase-shifted Analysis of Gene Expression (PAGE) Public Electron Paramagnetic Resonance Software Tools Systematic Variation Normalization (SVN) TAGster TRIad Multi-Marker All Scientists All Laboratories	TRIad Multi-Marker NIEHS Software and Online Tools Updates The TRIad Multi-Marker (TRIMM) program performs max_Z2, and sum_log(P) tests, association tests for a child's or mother's genetic effects using multiple markers from triad families. Statistical significance is evaluated via permutation. It also outputs the nominated risk-haplotype-tagging alleles. For details, see Shi M, Umbach DM, Weinberg CR "Identification of Risk-related Haplotypes Using Multiple SNPs from Nuclear Families". Download trimm.zip (http://www.niehs.nih.gov//research/resources/software/triad/docs/trimm.zip) is the ZIPPED set of the following 5 files: R source code: TRIMM.r Program documentation: TRIMM_Documentation.pdf 3 Example files: geno.m geno.f geno.c
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This page URL: http://www.niehs.nih.gov/research/resources/software/triad/index.cfm NIEHS website: http://www.niehs.nih.gov/ Email the Web Manager at webmanager@niehs.nih.gov Last Reviewed: August 11, 2008

TRIad Multi-Marker

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