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Publications - 2008


Bo, W., Jin, H., Kim, D., Liu, X., Lee, H., Pestieau, N., Yu, Y., Glimm, J., and Grove, J.  Compressible multi species multi phase flow models.  Phys. Rev. E, submitted.  BNL-77997-2007-JA.

Bo, W., Jin, H., Kim, D., Liu, X., Lee, H., Pestieau, N., Yu, Y., Glimm, J., and Grove, J.  Comparison and validation of multi phase closure models.  Computers and Mathematics with Applications 56(5): 1291-1302 (2008).  Stony Brook University Preprint No. SUNYSB-AMS-07-02.

Ding, F., Layten, M., and Simmerling, C.  Solution structure of HIV-1 protease flaps probed by comparison of molecular dynamics simulation ensembles and EPR experiments.  J. Am. Chem. Soc. 130(23): 7184-7185 (2008).

Du, J., Lu, T., and Samulyak, R.  Algorithms for magnetohydrodynamics of ablated materials.  J. Nanoscience and Nanotechnology, accepted.

Gilman, Y., Allen, P.B., and Hybertsen, M.S.  Density functional study of adsorption of isocyanides on the gold (111) surface.  J. Phys. Chem. C 112(9): 3314-3320 (2008).  BNL-77235-2006-JA.

Glimm, J. and Li, X.L.  Recent progress in turbulent mixing.  In M. Legrand and M. Vandenboomgarde (eds.) Proc. 10th International Workshop on the Physics of Compressible Turbulent Mixing, 17-21 July, Paris, France, 2006.  Stony Brook University Preprint No. SUNYSB-AMS-06-13, in press.

Glimm, J., Ji, X., Li, J., Li, X., Zhang, P., Zhang, T., and Zheng, Y.  Transonic shock formation in a rarefaction Riemann problem for the 2-D compressible Euler equations.  SIAM J. Appl. Math., submitted.  BNL-80158-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-08.

Jin, H. and Glimm, J.  Verification and validation for turbulent mixing.  Nonlinear Analysis 69(3): 874-879 (2008).  BNL-78142-2007-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-04.

Kang, K.S., Davenport, J.W., Glimm, J., Keyes, D.E., and McGuigan, M.  Linear augmented Slater-type orbital method for free standing clusters.  J. Computational Chemistry, submitted.

Kocharian, A.N., Fernando, G.W., Palandage, K., and Davenport, J.W.  Charge and spin pairing instabilities in nanoclusters:  Exact calculations.  Phys. Rev. B, submitted.

Lee, H., Jin, H., Yu, Y., and Glimm, J.  On validation of turbulent mixing simulations of Rayleigh-Taylor instability.  Phys. Fluids 20(1): 012102 (2008).  BNL-78141-2007-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-03.

Lim, H., Yu, Y., Glimm, J., Li, X., and Sharp, D.H.  Chaos, transport, and mesh convergence for fluid mixing.  Acta Mathematicae Applicatae Sinica, submitted.    BNL-80124-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-09.  Los Alamos National Laboratory Preprint No. LA-UR-08-0068.

Lim, H., Yu, Y., Jin, J., Kim, D., Lee, H., Glimm, J., Li, X., and Sharp, D.H.  Multi scale models for fluid mixing.  Special Issue Computer Methods in Applied Mechanics and Engineering, in press.  BNL-80125-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-05.

Lu, T., Xu, Z., Samulyak, R., Glimm, J., and Ji, X.M.  Dynamic phase boundaries for compressible fluids.  SIAM J. on Scientific Computing 30(2): 895-915 (2008).

McGuigan, M.  Toward the graphics Turing scale on a Blue Gene supercomputer.  Submitted to SC08, November 15-21, 2008, Austin, TX.  BNL-80138-2008-CP.

McGuigan, M., Davenport, J., and Glimm, J. Computational approach to finite size and shape effects in iron nanomagnets. J. Magnetism and Magnetic Materials 320 (3-4): 190-196 (2008).  BNL-77485-2007-JA.

Parks, P., Lu, T., and Samulyak, R.  Charging and rotation of pellet ablation cloud.  Phys. Rev. Letters, submitted.  BNL-72955-2007-JA.

Samulyak, R., Lu, T., Parks, P., Glimm, J., and Li, X.  Simulation of pellet ablation for Tokamak fueling with ITAPS front tracking.  J. Physics: Conference Series, submitted.  BNL-81285-2008-JA.

Song, K., Hornak, V., de los Santos, C., Grollman, A., and Simmerling, C.  Molecular mechanics parameters for the FapydG DNA lesion.  J. Computational Chemistry 29(1): 17-23 (2008).  BNL-76949-2006-JA.

Xu, Z.L., Lu, T., Samulyak, R., Glimm, M., and Ji, X.M. Dynamic phase boundaries for compressible fluids.  SIAM J. on Scientific Computing 30(2): 895-915 (2008).  Stony Brook University Preprint No. SUNYSB-AMS-06-07.


 



 

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Last Modified: August 14, 2008
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