Epidemiology of Fish and Wildlife Diseases
Birds
Samples of genetics and genomics research from the USGS Biological Resources Discipline about the epidemiology of avian diseases.
Genetic Assessment of Avian Influenza |
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A female Northern Pintail marked with a solar-powered satellite transmitter. Photo credit: Dr. Tetsuo Shimada, Izunuma-Uchinuma Environmental Foundation |
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Locations in Japan where Northern Pintail Ducks where captured and radiomarked. Larger view |
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Capture of Northern Pintails at Lake Izunuma-Uchinuma, Japan |
Evaluating exchange of avian-borne pathogens between Asia and North America by migratory birds requires an understanding of patterns of contact among birds from each continent. Biologists at the Alaska Science Center (USGS) are comparing neutral nuclear and mitochondrial genetic similarities between Asian and North American pintails to evaluate the degree of reproductive isolation between these populations, and are assessing transcontinental transmission of avian influenza by comparing genetic similarities of low pathogenic (non-H5N1) virus strains in pintails wintering in California to those from Japan. Collaborators include the Laboratory of Biodiversity Science (University of Tokyo), USGS National Wildlife Health Center, Western Ecological Research Center, and the U.S. Fish and Wildlife Service.
For more information on genetic analyses of avian influenza in northern pintails, see the 2007 Progress Report at http://alaska.usgs.gov/science/biology/avian_influenza/pintail_movements.html
or contact Dirk V. Derksen, Alaska Science Center.
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Distribution of P. multocida serotype 1 isolates cultured from wild birds and environmental samples collected in Central California. Isolates are represented on the map according to their collection location using dendrogram branch designations from figure 3a. Collection sites are indicated with triangles. Larger view |
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Principal components analysis of P. multocida serotype 1 isolates cultured from wild birds and environmental samples. Each isolate is designated according to its collection location and the cluster encompassing 49 of the 61 Central California P. multocida isolates is circled. Larger view |
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Birds affected by avian cholera. Photo credit: USGS |
Avian cholera, an infectious disease caused by the bacterium Pasteurella multocida, kills thousands of North American wild waterfowl annually. Pasteurella multocida serotype 1 isolates cultured during a laboratory challenge study of mallard ducks (Anas platyrhynchos) and collected from wild birds and environmental samples during avian cholera outbreaks were characterized using amplified fragment length polymorphism (AFLP) analysis, a whole-genome DNA fingerprinting technique. Comparison of the AFLP profiles of 53 isolates from the laboratory challenge demonstrated that P. multocida underwent genetic changes during a three month period. Analysis of 120 P. multocida serotype 1 isolates collected from wild birds and environmental samples revealed that isolates were distinguishable from one another based upon regional and temporal genetic characteristics. Thus, AFLP analysis had the ability to distinguish P. multocida isolates of the same serotype by detecting spatiotemporal genetic changes and provides a tool to advance the study of avian cholera epidemiology. Further application of AFLP technology to the examination of wild bird avian cholera outbreaks may facilitate more effective management of this disease by providing the potential to investigate correlations between virulence and P. multocida genotypes, to identify affiliations between bird species and bacterial genotypes, and to elucidate the role of specific bird species in disease transmission.
For more information contact David S. Blehert, National Wildlife Health Center. |
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