Fish Image
U.S. Food & Drug Administration
Seafood Products Research Center
Center for Food Safety & Applied Nutrition
Regulatory Fish Encyclopedia:
IEF Gel Lane Banding Pattern Peak Report Data
Gel Image

Peak Report Data from Isoelectric Focusing for a specimen of:
Pacific Cod  ----  Go to Display Gel Lane Navigator.


FDA Seafood List Scientific Name: Gadus macrocephalus
FDA Seafood List Common Name: Pacific Cod
FDA Seafood List Market Name: Cod (Alaska Cod)
Unique IEF Gel Code: 19940912gel01
Unique Web Code: pcg01Srr
Tissue Aliquot Code: gadumacr I94-002 #01a Gel Analysis Conditions
Gel ImageFish ImageCalibrated Gel ImageCalibrated Comparison Gel Image
Gel ImageFish ImageCalibrated GelComparison Gel

DISPLAY GEL LANE NAVIGATOR
RETURN TO TOP OF THIS DOCUMENT
Lane a
pI Markers
Lane b
Specimen
Lane c
pI Markers
Lane d
Co-Migrated
Lane e
Specimen
Lane f
pI Markers
Go to Gel Schematic

 
DISPLAY GEL LANE LETTER: Lane a
DIGITAL REPORT GEL LANE: 11
LANE TYPE: pI Markers
ACTUAL GEL LANE: 13
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
13.5605.20.0869644192.7805619.613.13.560.419.30.0811097
24.5521518.70.13522351.114227.95.24.55214.850.12699
35.230326.40.18831451.5796411.17.45.2302.84.90.182633
45.8545739.80.2830831.7263412.28.15.85457.13.40.284886
56.5562154.10.21329141.4670410.36.96.55620.340.209531
66.8566057.50.055668270.6132634.32.96.85659.77.20.0481467
77.3574765.10.13972851.258858.95.97.357465.20.137865
88.1590078.50.0649571121.239488.75.88.15898.811.50.0605747
98.45964840.097237281.36039.66.48.45963.67.90.0975025
108.65100187.30.088517371.035317.34.98.651000.67.10.0819562
PeakCounter: 10
DISPLAY GEL LANE LETTER: Lane b
DIGITAL REPORT GEL LANE: 12
LANE TYPE: Specimen
ACTUAL GEL LANE: 14
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
13.7941059.20.050867960.5160562.62.13.794104.86.40.0455643
24.10915213.30.33625942.7365413.911.34.109152.14.40.349079
34.30918215.90.20722941.44787.464.309181.940.206439
44.47620718.10.010212320.02307250.10.14.476206.52.20.00589994
54.63923020.10.0328184120.7047763.62.94.639225.312.50.0318557
64.82325522.30.096036830.4083332.11.74.823254.92.60.088015
74.95627323.80.065351130.39812321.64.956272.73.50.064602
85.052286250.037727930.2181561.10.95.052285.43.30.0371693
95.11929525.80.014305480.2091261.10.95.119295.48.10.0146198
105.18530426.60.045599340.2910021.51.25.185304.73.70.0446038
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
115.25531927.90.28886342.2154811.29.25.2553194.20.295928
125.32733629.30.13792930.8230484.23.45.327336.13.30.139134
135.43636231.60.10464230.59361532.55.436362.23.30.100839
145.52938433.50.012994450.1217930.60.55.529383.75.40.0126592
155.57639534.50.013222930.07475610.40.35.5763953.20.013378
165.62640735.50.30599531.519577.76.35.626406.72.80.311403
175.68542136.80.16477930.7574613.83.15.6854212.60.165305
185.78244438.80.020307390.2810791.41.25.782440.19.10.0174007
195.83345639.80.1130.4932312.525.8334562.70.103322
205.91647541.50.019742420.08802950.40.45.916475.42.40.0203547
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
215.96448642.40.0295430.1491310.80.65.964485.530.0284221
225.99549343.10.034011350.333211.71.45.995494.95.10.037165
236.03950343.90.24724920.78985843.36.039502.71.80.244036
246.07851244.70.00957420.02709840.10.16.0785121.60.00972335
256.14852846.10.22311231.201396.156.148526.93.40.200081
266.25855348.30.070385570.6619833.42.76.258553.370.0532394
276.37758050.70.0605186181.800289.17.46.377579.3180.0564288
287.12670761.70.033860580.4192022.11.77.126712.38.50.0279038
297.37175065.50.029405890.39420221.67.371748.48.90.0249882
PeakCounter: 29
DISPLAY GEL LANE LETTER: Lane c
DIGITAL REPORT GEL LANE: 13
LANE TYPE: pI Markers
ACTUAL GEL LANE: 15
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
13.5625.40.0804382131.7081114.49.13.56312.90.0747558
24.5522119.30.14319840.9862348.35.34.55221.14.40.125574
35.2309270.2030241.3796811.77.45.2309.140.196748
45.8546340.50.33197631.7142814.59.25.85463.12.90.331517
56.55618540.18003741.3523811.47.26.55617.84.40.174037
66.8565857.50.043309670.47614742.56.85657.97.10.0375763
77.3574565.10.12435651.088239.25.87.35744.55.10.121198
88.1589678.30.0539606121.073899.15.78.15894.8120.0506159
98.4596284.10.090451181.1930110.16.48.45961.67.60.0880814
108.65100087.40.08898260.8676667.34.68.6510005.90.0831294
PeakCounter: 10
DISPLAY GEL LANE LETTER: Lane d
DIGITAL REPORT GEL LANE: 14
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 16
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
13.5605.20.0576139131.288665.54.73.560.813.10.0554574
23.92912711.10.037718580.5173352.21.93.929128.88.40.0346103
34.15316214.20.35246642.4419610.58.84.153161.93.80.358114
44.3218816.40.18971341.292175.54.74.32188.13.80.19206
54.5522419.60.1028171.04214.53.84.55223.96.90.0848901
64.64723720.70.036770750.3081671.31.14.647236.44.90.0356061
74.80425822.60.010738340.06624830.30.24.804257.53.60.0104541
84.87126723.40.01412920.04019430.20.14.871267.31.70.0136575
94.94627724.20.059528630.332221.41.24.946277.43.20.0577023
105.02128725.10.032060930.1558140.70.65.0212872.80.0311825
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
115.10329826.10.024844850.22762210.85.103298.550.0257999
125.231127.20.10243640.70766132.65.2310.23.80.10372
135.25932528.40.23338641.780257.66.45.259324.84.10.24367
145.32334029.70.15585130.7281723.12.65.323340.62.70.153786
155.43836732.10.094560530.5401062.325.438367.43.20.0941363
165.51938633.80.0095292240.06831320.30.25.519386.94.50.00863618
175.63841436.20.23996831.432056.15.25.638414.13.40.236863
185.70142937.50.13785340.8996343.93.35.701428.53.90.13135
195.79145039.40.014645360.1323830.60.55.791449.35.70.0130167
205.8546440.60.21809831.076044.63.95.85463.92.80.219736
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
215.94248442.30.0093520340.07136670.30.35.942483.14.40.00908401
225.98849443.20.037197130.1730650.70.65.988493.930.0329535
236.02550243.90.023920180.3157241.41.16.025503.880.0223817
246.07651344.90.14321420.569072.42.16.076512.82.40.136014
256.19553947.20.1481130.8543433.73.16.195537.63.30.144353
266.31156449.30.06372760.4956762.11.86.311563.560.0466574
276.40758551.20.0434859181.103434.746.407587.4180.0345863
286.5561653.90.089626960.7879733.42.96.55614.260.0746962
296.8566057.70.04889260.47198821.76.85660.16.40.0413272
307.3574665.30.12842261.362285.84.97.35745.26.20.123156
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
318.1589378.10.0085797660.1048370.40.48.15894.36.20.0095273
328.4596584.40.072625691.139514.94.18.45964.390.0715348
338.65100487.80.063307970.8010553.42.98.651003.870.0649957
PeakCounter: 33
DISPLAY GEL LANE LETTER: Lane e
DIGITAL REPORT GEL LANE: 15
LANE TYPE: Specimen
ACTUAL GEL LANE: 17
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
13.8781129.80.0241027130.5237413.22.73.878114.313.30.0222559
24.14315313.40.30548752.464191512.84.1431534.50.307341
34.31117915.70.16364941.22517.46.44.311179.44.20.163931
44.61722519.70.0281634130.5751663.534.617221.512.80.0253247
54.81725222.10.0059611210.01090820.10.14.817252.21.30.004684
64.899263230.0099875240.05842640.40.34.899263.83.60.00920233
74.99627624.20.0072138430.03806440.20.24.9962752.90.00752527
85.0728625.10.0082272750.06887440.40.45.07286.24.90.00788492
95.17430026.30.011864330.05367860.30.35.174298.62.90.0103157
105.24531427.50.13972161.3158786.95.245314.86.10.122034
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
115.34333729.50.0500101121.350478.275.343328.812.10.0630701
125.43335831.40.043388870.529753.22.85.433361.970.0429984
135.53638233.50.010702770.1200920.70.65.536380.87.30.0092626
145.59639634.70.00058323910005.59639310
155.63840635.60.12993240.5986813.63.15.638406.33.60.0949903
165.69441936.70.0791927131.8006710.99.45.694417.713.10.0778324
175.86145840.10.040956360.4141362.52.25.861457.85.90.0397648
185.94347741.80.00072188710.00586508005.943478.30.90.00365511
195.99448942.90.020009390.3183911.91.75.9944929.50.0189196
206.03349843.60.022362860.0057422006.033495.65.80.000558992
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
216.05950444.20.10587440.65780943.46.059504.93.60.104539
226.10651545.10.0098871340.05074660.30.36.106517.63.90.00726833
236.15452646.10.075481440.6885734.23.66.154528.240.0965631
246.17153046.50.1315530.3685472.21.96.171531.82.60.0803026
256.296559490.068456580.9523285.856.296559.78.10.0663101
266.37857850.70.0506692100.7088344.33.76.378578.69.60.0417498
276.46859952.50.0458435130.9224875.64.86.468599.712.60.0412001
287.08170061.30.01349430.05877250.40.37.081700.62.80.0118251
297.16271462.60.024124290.3404092.11.87.162715.68.70.0221965
307.40175666.30.0145247120.2205761.31.17.401752.912.20.0102012
PeakCounter: 30
DISPLAY GEL LANE LETTER: Lane f
DIGITAL REPORT GEL LANE: 16
LANE TYPE: pI Markers
ACTUAL GEL LANE: 18
Go to Gel Schematic
Return to Lane Navigator
BandpILoc% RFAmplitudeWidthIntegr. OD% Integr. OD% Lane IntODpIG. LocG. SigmaG. Ampl
13.5484.20.125519142.7793920.213.83.547.813.70.114571
24.5520918.30.12449661.173218.55.84.55208.35.50.119287
35.229726.10.1628251.51497117.55.2296.95.20.162965
45.8544839.30.25440441.7546812.88.75.85447.83.80.259124
56.5562154.50.20609241.4713810.77.36.55621.34.20.199614
66.85661580.052110670.5174553.82.66.85660.36.70.0435494
77.3574865.60.15046161.4552510.67.27.35746.85.60.14578
88.1589878.80.0665226111.152248.45.78.15899.410.80.060022
98.4596684.70.090305771.082647.95.48.459666.80.0893897
108.65100488.10.087032860.8423696.14.28.651003.75.60.0855518
PeakCounter: 10
Gel Banding Patterns Display in HTML using GIF stacking technique
(Uses Migration Position Normalized Data from above text peak reports)

Return to Lane Navigator    Go to Gel Schematic Key

a b c d e f
MK SP MK CO SP MK
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pI 3.50 label for gel schematic
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pI 4.55 label for gel schematic
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pI 3.50 label for gel schematic
white spacer for gel schematic
pI 4.55 label for gel schematic
white spacer for gel schematic
pI 5.20 label for gel schematic
white spacer for gel schematic
pI 5.8 label for gel schematic
white spacer for gel schematic
pI 6.55 label for gel schematic
white spacer for gel schematic
pI 6.85 label for gel schematic
white spacer for gel schematic
pI 7.35 label for gel schematic
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pI 8.15 label for gel schematic
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pI 8.45 label for gel schematic
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Key to Gel Schematic: MK=pI Marker Lanes, pI bands are in red
SP=Specimen Lanes, Specimen bands are in blue
CO=Co-migrated Lanes of pI Markers and Specimen (pI bands are in red, Specimen bands are in blue)
Note:  In co-migrated lanes, some pI Markers and Specimen bands may overlap in experiment.  Red pI
band is reported when overlapped peak position is equal to nominal pI Marker position.  Blue Specimen
band is reported when overlapped peak position deviates slightly from nominal pI Marker position.
Weak (<2% rel. intensity), Medium (2-6% rel. intensity), and Strong (>6% rel. intensity) band intensities indicated by gel schematic band thickness.
Return to Top of Gel Schematic

PeakCount: 122
HTML Forms TextArea Normalized Peak-Position Peak-Area for Copy-Paste events
DISPLAY GEL LANE LETTER: Lane a
DIGITAL REPORT GEL LANE: 11
LANE TYPE: pI Markers
ACTUAL GEL LANE: 13
PeakCount: 10 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane b
DIGITAL REPORT GEL LANE: 12
LANE TYPE: Specimen
ACTUAL GEL LANE: 14
PeakCount: 29 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane c
DIGITAL REPORT GEL LANE: 13
LANE TYPE: pI Markers
ACTUAL GEL LANE: 15
PeakCount: 10 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane d
DIGITAL REPORT GEL LANE: 14
LANE TYPE: Co-Migrated
ACTUAL GEL LANE: 16
PeakCount: 33 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane e
DIGITAL REPORT GEL LANE: 15
LANE TYPE: Specimen
ACTUAL GEL LANE: 17
PeakCount: 30 Return to Lane Navigator
DISPLAY GEL LANE LETTER: Lane f
DIGITAL REPORT GEL LANE: 16
LANE TYPE: pI Markers
ACTUAL GEL LANE: 18
PeakCount: 10 Return to Lane Navigator



 RETURN TO TOP THIS DOCUMENT
EXPERIMENTAL CONDITIONS: Gels were scanned at 600 d.p.i. in Adobe Photoshop 3.02 using a Sharp JX-325 Scanner with Film Scanner Attachment. Gels were analyzed for Densitometry, Intregration, and Migration Position Normalization in EXCEL 5.0 Format. *.xls files were imported into Paradox 7.0 to save as *.db files.

 RETURN TO TOP THIS DOCUMENT
Delphi 4.0 Generation of this Isoelectric Focusing (IEF) RFE PAGE 5 Tools in HTML
This HTML is automatically generated from a series of Paradox 7.0 database filesof IEF peak reports is controlled with a main RFEIEF Paradox 7.0 database withDelphi 3.0 front end (see Delphi 2.0 form) and back end for facile addition and modification of the Content of these RFE PAGE 5 HTML tools.
Contact Brad Tenge at btenge@ora.fda.gov for details.


RFE Contacts
A summary list of RFE contact personnel is available at http://www.cfsan.fda.gov/~frf/rfecon.html.

For isoelectric focusing laboratory experiments for fish species identification, you may contact

For isoelectric focusing gel analysis and pattern recognition applications, you may contact

For CFSAN web consultation and posting, you may contact


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Last updated on 2003-FEB-27 by bjt/frf/nln