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IMAGEJ archives – November 2002

Table of contents:

• ANG: Re: Watershed segmentation plugin
• bug in imageJ (4 messages)
• close all images open (2 messages)
• Color correction (8 messages)
• copy ROI (3 messages)
• could you plese, remove me from the list
• distance map and ultimate points (2 messages)
• Endothelial tube formation
• FireWire Cameras (2 messages)
• Fw: Image Segmentation by anisotropic diffusion.
• fwhm (3 messages)
• Get results in a plugin (4 messages)
• Getting result values (2 messages)
• HELP - how to force LUT indexing to an absolute pixel range (2 messages)
• Help - need to force LUT application for 16-bit greyscale PNG images
• Image Segmentation by anisotropic diffusion. (3 messages)
• ImageJ 1.29r: GelAnalyzer bug or features ?
• IMAGEJ Digest - 16 Nov 2002 to 17 Nov 2002 (#2002-267)
• IMAGEj ON A jORNADA 720? (5 messages)
• IMAGEj ON A jORNADA 720? vs. Toshiba e740 (2 messages)
• ImageJ on a Palm (3 messages)
• Images from Bruker 1500 CCD Detector
• importing a package
• jvm problem (4 messages)
• light source shutter control
• Macro arrays and log - results control (3 messages)
• Making script (executable if possible)
• Mean greyscale on RGB (2 messages)
• Measure stack plug in (2 messages)
• Measuring the total area of particles (2 messages)
• Memory control under windows... (2 messages)
• More on Images from Bruker 1500 CCD Detector
• need to de-interlace after switching to Jaguar (3 messages)
• opening .mov files
• Opening .zvi images (2 messages)
• Opening an image from a plugin (2 messages)
• PET DICOM images (2 messages)
• Placing windows in a plugin (2 messages)
• Plugin for Calculation of Bone Structure (4 messages)
• Plugin needed for the PixelSmart - Video Frame Grabber
• porosity determination 3D (2 messages)
• Problems with FFT
• Profile plot coordinates
• QImaging QiCam (5 messages)
• QImaging REtiga EX and calcium imaging
• ROI (2 messages)
• roi generate
• saving a recently updated TIFF (3 messages)
• seeking advise (2 messages)
• segmentation by shape... (3 messages)
• segmentation...
• sorry, only test mail
• Stack overflow macro error (2 messages)
• Stack Particle Analyzer (aka particle tracking) (4 messages)
• stop list
• surface rendering (3 messages)
• Using ImageJ for cell counts on IHC markers
• Watershed segmentation plugin (3 messages)
• Z-Projection

1. ANG: Re: Watershed segmentation plugin
   • ANG: Re: Watershed segmentation plugin (19 lines)

2. bug in imageJ
   • bug in imageJ (39 lines)
   • Re: bug in imageJ (44 lines)
   • Re: bug in imageJ (38 lines)
   • Re: bug in imageJ (41 lines)

3. close all images open
   • close all images open (43 lines)
   • Re: close all images open (39 lines)

4. Color correction
   • Color correction (118 lines)
   • Re: Color correction (119 lines)
   • Re: Color correction (174 lines)
   • Re: Color correction (205 lines)
   • Re: Color correction (206 lines)
   • Re: Color correction (256 lines)
   • Re: Color correction (397 lines)
   • Re: Color correction (488 lines)

5. copy ROI
   • copy ROI (28 lines)
   • Re: copy ROI (47 lines)
   • Re: copy ROI (44 lines)

6. could you plese, remove me from the list
   • could you plese, remove me from the list (40 lines)

7. distance map and ultimate points
   • distance map and ultimate points (37 lines)
   • Re: distance map and ultimate points (81 lines)

8. Endothelial tube formation
   • Endothelial tube formation (43 lines)

9. FireWire Cameras
   • FireWire Cameras (116 lines)
   • Re: FireWire Cameras (118 lines)

10. Fw: Image Segmentation by anisotropic diffusion.
    • Fw: Image Segmentation by anisotropic diffusion. (103 lines)

11. fwhm
    • fwhm (34 lines)
    • Re: fwhm (61 lines)
    • Re: fwhm (66 lines)

12. Get results in a plugin
    • Get results in a plugin (41 lines)
    • Re: Get results in a plugin (38 lines)
    • Re: Get results in a plugin (59 lines)
    • Re: Get results in a plugin (47 lines)

13. Getting result values
    • Getting result values (50 lines)
    • Re: Getting result values (52 lines)

14. HELP - how to force LUT indexing to an absolute pixel range
    • HELP - how to force LUT indexing to an absolute pixel range (73 lines)
    • Re: HELP - how to force LUT indexing to an absolute pixel range (55 lines)

15. Help - need to force LUT application for 16-bit greyscale PNG images
    • Help - need to force LUT application for 16-bit greyscale PNG images (135 lines)

16. Image Segmentation by anisotropic diffusion.
    • Image Segmentation by anisotropic diffusion. (49 lines)
    • Re: Image Segmentation by anisotropic diffusion. (44 lines)
    • Re: Image Segmentation by anisotropic diffusion. (46 lines)

17. ImageJ 1.29r: GelAnalyzer bug or features ?
    • ImageJ 1.29r: GelAnalyzer bug or features ? (57 lines)

18. IMAGEJ Digest - 16 Nov 2002 to 17 Nov 2002 (#2002-267)
    • Re: IMAGEJ Digest - 16 Nov 2002 to 17 Nov 2002 (#2002-267) (91 lines)

19. IMAGEj ON A jORNADA 720?
    • IMAGEj ON A jORNADA 720? (39 lines)
    • Re: IMAGEj ON A jORNADA 720? (47 lines)
    • Re: IMAGEj ON A jORNADA 720? (67 lines)
    • Re: IMAGEj ON A jORNADA 720? (90 lines)
    • Re: IMAGEj ON A jORNADA 720? (51 lines)

20. IMAGEj ON A jORNADA 720? vs. Toshiba e740
    • Re: IMAGEj ON A jORNADA 720? vs. Toshiba e740 (78 lines)
    • Re: IMAGEj ON A jORNADA 720? vs. Toshiba e740 (115 lines)

21. ImageJ on a Palm
    • ImageJ on a Palm (43 lines)
    • Re: ImageJ on a Palm (49 lines)
    • Re: ImageJ on a Palm (77 lines)

22. Images from Bruker 1500 CCD Detector
    • Images from Bruker 1500 CCD Detector (51 lines)

23. importing a package
    • importing a package (82 lines)

24. jvm problem
    • jvm problem (44 lines)
    • Re: jvm problem (45 lines)
    • Re: jvm problem (77 lines)
    • Re: jvm problem (60 lines)

25. light source shutter control
    • light source shutter control (41 lines)

26. Macro arrays and log - results control
    • Macro arrays and log - results control (43 lines)
    • Re: Macro arrays and log - results control (37 lines)
    • Re: Macro arrays and log - results control (51 lines)

27. Making script (executable if possible)
    • Making script (executable if possible) (29 lines)

28. Mean greyscale on RGB
    • Mean greyscale on RGB (43 lines)
    • Re: Mean greyscale on RGB (40 lines)

29. Measure stack plug in
    • Measure stack plug in (38 lines)
    • Re: Measure stack plug in (51 lines)

30. Measuring the total area of particles
    • Measuring the total area of particles (45 lines)
    • Re: Measuring the total area of particles (52 lines)

31. Memory control under windows...
    • Re: Memory control under windows... (48 lines)
    • Re: Memory control under windows... (56 lines)

32. More on Images from Bruker 1500 CCD Detector
    • More on Images from Bruker 1500 CCD Detector (79 lines)

33. need to de-interlace after switching to Jaguar
    • need to de-interlace after switching to Jaguar (76 lines)
    • need to de-interlace after switching to Jaguar (70 lines)
    • Re: need to de-interlace after switching to Jaguar (99 lines)

34. opening .mov files
    • opening .mov files (58 lines)

35. Opening .zvi images
    • Opening .zvi images (49 lines)
    • Re: Opening .zvi images (85 lines)

36. Opening an image from a plugin
    • Opening an image from a plugin (58 lines)
    • Re: Opening an image from a plugin (79 lines)

37. PET DICOM images
    • PET DICOM images (40 lines)
    • Re: PET DICOM images (51 lines)

38. Placing windows in a plugin
    • Placing windows in a plugin (46 lines)
    • Re: Placing windows in a plugin (42 lines)

39. Plugin for Calculation of Bone Structure
    • Re: Plugin for Calculation of Bone Structure (97 lines)
    • Re: Plugin for Calculation of Bone Structure (122 lines)
    • Re: Plugin for Calculation of Bone Structure (141 lines)
    • Re: Plugin for Calculation of Bone Structure (180 lines)

40. Plugin needed for the PixelSmart - Video Frame Grabber
    • Plugin needed for the PixelSmart - Video Frame Grabber (49 lines)

41. porosity determination 3D
    • porosity determination 3D (40 lines)
    • Re: porosity determination 3D (34 lines)

42. Problems with FFT
    • Problems with FFT (38 lines)

43. Profile plot coordinates
    • Profile plot coordinates (47 lines)

44. QImaging QiCam
    • QImaging QiCam (54 lines)
    • Re: QImaging QiCam (58 lines)
    • Re: QImaging QiCam (74 lines)
    • Re: QImaging QiCam (48 lines)
    • Re: QImaging QiCam (102 lines)

45. QImaging REtiga EX and calcium imaging
    • QImaging REtiga EX and calcium imaging (124 lines)

46. ROI
    • ROI (20 lines)
    • Re: ROI (34 lines)

47. roi generate
    • roi generate (34 lines)

48. saving a recently updated TIFF
    • saving a recently updated TIFF (81 lines)
    • Re: saving a recently updated TIFF (53 lines)
    • Re: saving a recently updated TIFF (52 lines)

49. seeking advise
    • seeking advise (34 lines)
    • Re: seeking advise (77 lines)

50. segmentation by shape...
    • segmentation by shape... (44 lines)
    • Re: segmentation by shape... (56 lines)
    • Re: segmentation by shape... (57 lines)

51. segmentation...
    • segmentation... (41 lines)

52. sorry, only test mail
    • sorry, only test mail (42 lines)

53. Stack overflow macro error
    • Stack overflow macro error (41 lines)
    • Re: Stack overflow macro error (43 lines)

54. Stack Particle Analyzer (aka particle tracking)
    • Stack Particle Analyzer (aka particle tracking) (51 lines)
    • Re: Stack Particle Analyzer (aka particle tracking) (47 lines)
    • Re: Stack Particle Analyzer (aka particle tracking) (75 lines)
    • Re: Stack Particle Analyzer (aka particle tracking) (91 lines)

55. stop list
    • stop list (32 lines)

56. surface rendering
    • surface rendering (47 lines)
    • Re: surface rendering (76 lines)
    • Re: surface rendering (84 lines)

57. Using ImageJ for cell counts on IHC markers
    • Using ImageJ for cell counts on IHC markers (52 lines)

58. Watershed segmentation plugin
    • Watershed segmentation plugin (36 lines)
    • Re: Watershed segmentation plugin (32 lines)
    • Re: Watershed segmentation plugin (53 lines)

59. Z-Projection
    • Z-Projection (59 lines)

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