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IMAGEJ archives – October 2001

Table of contents:

• "Fix Scale" in fluorescence image capture
• "Remove haze" and other stories (2 messages)
• 3d projections better in Y than X
• 3D-projections and import sequence (2 messages)
• about imagej and swing (4 messages)
• Analyze Particle (4 messages)
• Analyzing particle intensity
• Ant build file for ImageJ
• AVI header problem
• brightness/contrast problem w/Fluoview plugin
• color images (2 messages)
• Continued ROI woes (4 messages)
• Crashes (2 messages)
• editable min and max (2 messages)
• Error in Jview
• FFT filter out of memory (2 messages)
• Filetype data (not) in ImageJ-created files on Mac OS?
• Fitter.java - why a space in super("Curve Fitter") ?
• FWD: CALL FOR PAPERS: ISBI-2002
• GaussianBlur Kernel coefficients (2 messages)
• geog LUT
• How can I make "shortcuts" stick through relaunch? (2 messages)
• How to increase ImageJ memory in Mac? (3 messages)
• How to make a plugin "autorun" on ImageJ launch?
• IimageJ and LeicaDC300
• IJ_Prefs.txt not being written on my machine - anyone else seen this?
• Image alignment problem (2 messages)
• Image alignment with optical flow (Davide Viggiano)
• ImageJ performance under Mac OS X 10.1 (2 messages)
• measuring multiple ROIs simultaneously (2 messages)
• Measuring total signal from an area (2 messages)
• Memory in OSX
• multiple ROI (3 messages)
• Need help with test for mouse event modifier (2 messages)
• online API doesn't show ij.util package
• OSX - Can't Compile Multi-file Plugin (4 messages)
• particles in RGB slices (2 messages)
• Pb w/ PolygonRoi ? (4 messages)
• Pb while compiling and running plugins
• Plugin interface to ImageCanvas.zoomIn(x,y)
• Plugin management (2 messages)
• preferences
• R: Re: Image alignment problem
• re "Remove haze" and other stories
• reducing a stack to 8 bit color
• Results window empty
• retrieving date/time information in plugins (2 messages)
• ROI analysis of time-series data (was RE: Continued ROI woes)
• saving files in reversed byte order (2 messages)
• stacks (5 messages)
• Still multiple ROIs (4 messages)
• Subtract Problem (3 messages)
• surface plots (4 messages)
• TransformJ revisited
• Using B&C controls during editing (2 messages)
• what makes RoiManager a plugin?
• window tile and cascade
• windowcenter and windowwidth in imageJ

1. "Fix Scale" in fluorescence image capture
   • "Fix Scale" in fluorescence image capture (70 lines)

2. "Remove haze" and other stories
   • "Remove haze" and other stories (53 lines)
   • Re: "Remove haze" and other stories (139 lines)

3. 3d projections better in Y than X
   • 3d projections better in Y than X (28 lines)

4. 3D-projections and import sequence
   • 3D-projections and import sequence (65 lines)
   • Re: 3D-projections and import sequence (45 lines)

5. about imagej and swing
   • about imagej and swing (40 lines)
   • Re: about imagej and swing (55 lines)
   • Re: about imagej and swing (67 lines)
   • Re: about imagej and swing (38 lines)

6. Analyze Particle
   • Re: Analyze Particle (59 lines)
   • Re: Analyze Particle (28 lines)
   • Re: Analyze Particle (49 lines)
   • Re: Analyze Particle (41 lines)

7. Analyzing particle intensity
   • Re: Analyzing particle intensity (34 lines)

8. Ant build file for ImageJ
   • Ant build file for ImageJ (157 lines)

9. AVI header problem
   • AVI header problem (63 lines)

10. brightness/contrast problem w/Fluoview plugin
    • brightness/contrast problem w/Fluoview plugin (126 lines)

11. color images
    • color images (23 lines)
    • Re: color images (28 lines)

12. Continued ROI woes
    • Continued ROI woes (49 lines)
    • Re: Continued ROI woes (34 lines)
    • Re: Continued ROI woes (44 lines)
    • Re: Continued ROI woes (42 lines)

13. Crashes
    • Crashes (68 lines)
    • Re: Crashes (34 lines)

14. editable min and max
    • Re: editable min and max (35 lines)
    • Re: editable min and max (32 lines)

15. Error in Jview
    • Error in Jview (65 lines)

16. FFT filter out of memory
    • FFT filter out of memory (30 lines)
    • Re: FFT filter out of memory (36 lines)

17. Filetype data (not) in ImageJ-created files on Mac OS?
    • Filetype data (not) in ImageJ-created files on Mac OS? (27 lines)

18. Fitter.java - why a space in super("Curve Fitter") ?
    • Fitter.java - why a space in super("Curve Fitter") ? (36 lines)

19. FWD: CALL FOR PAPERS: ISBI-2002
    • FWD: CALL FOR PAPERS: ISBI-2002 (128 lines)

20. GaussianBlur Kernel coefficients
    • GaussianBlur Kernel coefficients (101 lines)
    • Re: GaussianBlur Kernel coefficients (32 lines)

21. geog LUT
    • geog LUT (94 lines)

22. How can I make "shortcuts" stick through relaunch?
    • How can I make "shortcuts" stick through relaunch? (18 lines)
    • Re: How can I make "shortcuts" stick through relaunch? (45 lines)

23. How to increase ImageJ memory in Mac?
    • Re: How to increase ImageJ memory in Mac? (39 lines)
    • Re: How to increase ImageJ memory in Mac? (36 lines)
    • Re: How to increase ImageJ memory in Mac? (55 lines)

24. How to make a plugin "autorun" on ImageJ launch?
    • How to make a plugin "autorun" on ImageJ launch? (20 lines)

25. IimageJ and LeicaDC300
    • IimageJ and LeicaDC300 (25 lines)

26. IJ_Prefs.txt not being written on my machine - anyone else seen this?
    • IJ_Prefs.txt not being written on my machine - anyone else seen this? (58 lines)

27. Image alignment problem
    • Re: Image alignment problem (65 lines)
    • Re: Image alignment problem (93 lines)

28. Image alignment with optical flow (Davide Viggiano)
    • Re: Image alignment with optical flow (Davide Viggiano) (55 lines)

29. ImageJ performance under Mac OS X 10.1
    • ImageJ performance under Mac OS X 10.1 (27 lines)
    • Re: ImageJ performance under Mac OS X 10.1 (64 lines)

30. measuring multiple ROIs simultaneously
    • measuring multiple ROIs simultaneously (72 lines)
    • Re: measuring multiple ROIs simultaneously (29 lines)

31. Measuring total signal from an area
    • Measuring total signal from an area (31 lines)
    • Re: Measuring total signal from an area (36 lines)

32. Memory in OSX
    • Memory in OSX (33 lines)

33. multiple ROI
    • Re: multiple ROI (50 lines)
    • Re: multiple ROI (33 lines)
    • Re: multiple ROI (35 lines)

34. Need help with test for mouse event modifier
    • Need help with test for mouse event modifier (67 lines)
    • Re: Need help with test for mouse event modifier (114 lines)

35. online API doesn't show ij.util package
    • online API doesn't show ij.util package (16 lines)

36. OSX - Can't Compile Multi-file Plugin
    • OSX - Can't Compile Multi-file Plugin (48 lines)
    • Re: OSX - Can't Compile Multi-file Plugin (68 lines)
    • Re: OSX - Can't Compile Multi-file Plugin (53 lines)
    • Re: OSX - Can't Compile Multi-file Plugin (39 lines)

37. particles in RGB slices
    • particles in RGB slices (28 lines)
    • Re: particles in RGB slices (34 lines)

38. Pb w/ PolygonRoi ?
    • Pb w/ PolygonRoi ? (409 lines)
    • Re: Pb w/ PolygonRoi ? (520 lines)
    • Re: Pb w/ PolygonRoi ? (79 lines)
    • Re: Pb w/ PolygonRoi ? (145 lines)

39. Pb while compiling and running plugins
    • Pb while compiling and running plugins (26 lines)

40. Plugin interface to ImageCanvas.zoomIn(x,y)
    • Plugin interface to ImageCanvas.zoomIn(x,y) (46 lines)

41. Plugin management
    • Plugin management (51 lines)
    • Re: Plugin management (57 lines)

42. preferences
    • preferences (68 lines)

43. R: Re: Image alignment problem
    • R: Re: Image alignment problem (108 lines)

44. re "Remove haze" and other stories
    • re "Remove haze" and other stories (88 lines)

45. reducing a stack to 8 bit color
    • reducing a stack to 8 bit color (28 lines)

46. Results window empty
    • Results window empty (29 lines)

47. retrieving date/time information in plugins
    • retrieving date/time information in plugins (30 lines)
    • Re: retrieving date/time information in plugins (55 lines)

48. ROI analysis of time-series data (was RE: Continued ROI woes)
    • ROI analysis of time-series data (was RE: Continued ROI woes) (58 lines)

49. saving files in reversed byte order
    • saving files in reversed byte order (40 lines)
    • Re: saving files in reversed byte order (73 lines)

50. stacks
    • stacks (38 lines)
    • stacks (311 lines)
    • Re: stacks (90 lines)
    • Re: stacks (61 lines)
    • Re: stacks (29 lines)

51. Still multiple ROIs
    • Still multiple ROIs (39 lines)
    • Re: Still multiple ROIs (37 lines)
    • Re: Still multiple ROIs (48 lines)
    • Re: Still multiple ROIs (44 lines)

52. Subtract Problem
    • Subtract Problem (56 lines)
    • Re: Subtract Problem (77 lines)
    • Re: Subtract Problem (99 lines)

53. surface plots
    • surface plots (43 lines)
    • Re: surface plots (55 lines)
    • Re: surface plots (68 lines)
    • Re: surface plots (85 lines)

54. TransformJ revisited
    • TransformJ revisited (49 lines)

55. Using B&C controls during editing
    • Using B&C controls during editing (40 lines)
    • Re: Using B&C controls during editing (59 lines)

56. what makes RoiManager a plugin?
    • what makes RoiManager a plugin? (189 lines)

57. window tile and cascade
    • window tile and cascade (29 lines)

58. windowcenter and windowwidth in imageJ
    • Re: windowcenter and windowwidth in imageJ (29 lines)

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