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IMAGEJ archives – February 2001

Table of contents:

• : 3-D reconstructions from Stereo pairs
• <No subject>
• Adding a button to GenericDialog
• Ajust Brightness & Constrast on stacks (6 messages)
• AW: Image archiving
• Can I use imageJ in Matlab?
• Cell Motility plugin
• CenterOfMass error when minThreshold==0 (2 messages)
• Code question (2 messages)
• Compile and Run with plugin subdirectories and externallly defined classes. (2 messages)
• CoolsnapFx
• Extending StackWindow (2 messages)
• Fill outside?
• finding source code methods for some 'Process' menu items? (2 messages)
• further question on using invertLut() in plugin? (2 messages)
• glitch 1.20s (2 messages)
• grouped measurements (4 messages)
• Help with an image program
• Help with my plug-in
• Here you have, ;o)
• histogram of real-valued images (2 messages)
• How to animate only a specified slices? (7 messages)
• I can't get a simple timer to work -- please help. (2 messages)
• Image archiving (6 messages)
• image flipping (2 messages)
• Image/J on Mac OS X preview?
• IMAGEJ Digest - 2 Feb 2001 to 3 Feb 2001 (#2001-28)
• Magnafire
• opening images as a stack vs. open images then making stack (2 messages)
• operations on whole stacks without warning (2 messages)
• particleAnalyzer exclude contacting edges doesn't use roi
• Plot Profile (2 messages)
• Plugin for analysis of localization of glomeruli in the olfactory bulb
• Plugin to calibrate tiffs with color table assigned. (2 messages)
• remove me please
• Roi movement via arrow keys stop 1 pixel too early
• segmented line or POLYLINE ROI
• Selective display of part of stack
• Showing animated stack of images in PowerPoint (3 messages)
• Stereology macros (2 messages)
• thresholding by region growing
• Twain occasionally fails with "Open Source" error
• unsubscribe (2 messages)
• unsubscripe
• Update function
• Upgrades and API
• using invertLUT() in plugin? (2 messages)
• using QuickKeys and AppleScript with ImageJ on Mac to launch a plugin? (2 messages)
• Virus sent to this list
• Volume determination (Biofilms) (2 messages)
• volume quantification of 3D rendered images (6 messages)
• Webstart enabling Image/J (was: Update function)
• Wrong HU value (CT-number) (2 messages)

1. : 3-D reconstructions from Stereo pairs
   • : 3-D reconstructions from Stereo pairs (63 lines)

2. <No subject>
   • <No subject> (26 lines)

3. Adding a button to GenericDialog
   • Re: Adding a button to GenericDialog (32 lines)

4. Ajust Brightness & Constrast on stacks
   • Ajust Brightness & Constrast on stacks (39 lines)
   • Re: Ajust Brightness & Constrast on stacks (33 lines)
   • Re: Ajust Brightness & Constrast on stacks (63 lines)
   • Re: Ajust Brightness & Constrast on stacks (64 lines)
   • Re: Ajust Brightness & Constrast on stacks (37 lines)
   • Re: Ajust Brightness & Constrast on stacks (64 lines)

5. AW: Image archiving
   • AW: Image archiving (76 lines)

6. Can I use imageJ in Matlab?
   • Can I use imageJ in Matlab? (17 lines)

7. Cell Motility plugin
   • Cell Motility plugin (51 lines)

8. CenterOfMass error when minThreshold==0
   • CenterOfMass error when minThreshold==0 (86 lines)
   • Re: CenterOfMass error when minThreshold==0 (31 lines)

9. Code question
   • Code question (112 lines)
   • Re: Code question (29 lines)

10. Compile and Run with plugin subdirectories and externallly defined classes.
    • Compile and Run with plugin subdirectories and externallly defined classes. (48 lines)
    • Re: Compile and Run with plugin subdirectories and externallly defined classes. (40 lines)

11. CoolsnapFx
    • CoolsnapFx (44 lines)

12. Extending StackWindow
    • Extending StackWindow (60 lines)
    • Re: Extending StackWindow (30 lines)

13. Fill outside?
    • Re: Fill outside? (29 lines)

14. finding source code methods for some 'Process' menu items?
    • finding source code methods for some 'Process' menu items? (42 lines)
    • Re: finding source code methods for some 'Process' menu items? (75 lines)

15. further question on using invertLut() in plugin?
    • further question on using invertLut() in plugin? (101 lines)
    • Re: further question on using invertLut() in plugin? (49 lines)

16. glitch 1.20s
    • glitch 1.20s (44 lines)
    • Re: glitch 1.20s (35 lines)

17. grouped measurements
    • grouped measurements (44 lines)
    • Re: grouped measurements (75 lines)
    • Re: grouped measurements (59 lines)
    • Re: grouped measurements (58 lines)

18. Help with an image program
    • Re: Help with an image program (95 lines)

19. Help with my plug-in
    • Help with my plug-in (55 lines)

20. Here you have, ;o)
    • Here you have, ;o) (67 lines)

21. histogram of real-valued images
    • histogram of real-valued images (45 lines)
    • Re: histogram of real-valued images (37 lines)

22. How to animate only a specified slices?
    • How to animate only a specified slices? (42 lines)
    • Re: How to animate only a specified slices? (35 lines)
    • Re: How to animate only a specified slices? (57 lines)
    • Re: How to animate only a specified slices? (36 lines)
    • Re: How to animate only a specified slices? (34 lines)
    • Re: How to animate only a specified slices? (76 lines)
    • Re: How to animate only a specified slices? (56 lines)

23. I can't get a simple timer to work -- please help.
    • I can't get a simple timer to work -- please help. (41 lines)
    • Re: I can't get a simple timer to work -- please help. (67 lines)

24. Image archiving
    • Image archiving (48 lines)
    • Re: Image archiving (48 lines)
    • Re: Image archiving (65 lines)
    • Re: Image archiving (59 lines)
    • Re: Image archiving (66 lines)
    • Re: Image archiving (87 lines)

25. image flipping
    • image flipping (27 lines)
    • Re: image flipping (24 lines)

26. Image/J on Mac OS X preview?
    • Image/J on Mac OS X preview? (64 lines)

27. IMAGEJ Digest - 2 Feb 2001 to 3 Feb 2001 (#2001-28)
    • Re: IMAGEJ Digest - 2 Feb 2001 to 3 Feb 2001 (#2001-28) (47 lines)

28. Magnafire
    • Magnafire (18 lines)

29. opening images as a stack vs. open images then making stack
    • opening images as a stack vs. open images then making stack (44 lines)
    • Re: opening images as a stack vs. open images then making stack (40 lines)

30. operations on whole stacks without warning
    • operations on whole stacks without warning (43 lines)
    • Re: operations on whole stacks without warning (31 lines)

31. particleAnalyzer exclude contacting edges doesn't use roi
    • particleAnalyzer exclude contacting edges doesn't use roi (75 lines)

32. Plot Profile
    • Plot Profile (42 lines)
    • Re: Plot Profile (50 lines)

33. Plugin for analysis of localization of glomeruli in the olfactory bulb
    • Plugin for analysis of localization of glomeruli in the olfactory bulb (49 lines)

34. Plugin to calibrate tiffs with color table assigned.
    • Re: Plugin to calibrate tiffs with color table assigned. (28 lines)
    • Re: Plugin to calibrate tiffs with color table assigned. (50 lines)

35. remove me please
    • remove me please (52 lines)

36. Roi movement via arrow keys stop 1 pixel too early
    • Re: Roi movement via arrow keys stop 1 pixel too early (25 lines)

37. segmented line or POLYLINE ROI
    • segmented line or POLYLINE ROI (65 lines)

38. Selective display of part of stack
    • Selective display of part of stack (65 lines)

39. Showing animated stack of images in PowerPoint
    • Showing animated stack of images in PowerPoint (46 lines)
    • Re: Showing animated stack of images in PowerPoint (46 lines)
    • Re: Showing animated stack of images in PowerPoint (71 lines)

40. Stereology macros
    • Stereology macros (67 lines)
    • Re: Stereology macros (68 lines)

41. thresholding by region growing
    • thresholding by region growing (91 lines)

42. Twain occasionally fails with "Open Source" error
    • Twain occasionally fails with "Open Source" error (25 lines)

43. unsubscribe
    • unsubscribe (48 lines)
    • unsubscribe (72 lines)

44. unsubscripe
    • unsubscripe (51 lines)

45. Update function
    • Update function (74 lines)

46. Upgrades and API
    • Upgrades and API (46 lines)

47. using invertLUT() in plugin?
    • using invertLUT() in plugin? (406 lines)
    • Re: using invertLUT() in plugin? (37 lines)

48. using QuickKeys and AppleScript with ImageJ on Mac to launch a plugin?
    • using QuickKeys and AppleScript with ImageJ on Mac to launch a plugin? (67 lines)
    • Re: using QuickKeys and AppleScript with ImageJ on Mac to launch a plugin? (59 lines)

49. Virus sent to this list
    • Virus sent to this list (35 lines)

50. Volume determination (Biofilms)
    • Volume determination (Biofilms) (28 lines)
    • Re: Volume determination (Biofilms) (56 lines)

51. volume quantification of 3D rendered images
    • volume quantification of 3D rendered images (42 lines)
    • Re: volume quantification of 3D rendered images (46 lines)
    • Re: volume quantification of 3D rendered images (64 lines)
    • Re: volume quantification of 3D rendered images (56 lines)
    • Re: volume quantification of 3D rendered images (87 lines)
    • Re: volume quantification of 3D rendered images (104 lines)

52. Webstart enabling Image/J (was: Update function)
    • Re: Webstart enabling Image/J (was: Update function) (129 lines)

53. Wrong HU value (CT-number)
    • Wrong HU value (CT-number) (45 lines)
    • Re: Wrong HU value (CT-number) (35 lines)

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